|
| Status |
Public on Nov 21, 2010 |
| Title |
Genetic abnormalities in various cell subpopulations of GBM brain tumors |
| Organism |
Homo sapiens |
| Experiment type |
Genome variation profiling by array
|
| Summary |
GBM is a heterogenous tumor. Based on membrane protein expression, the GBM single cell dissociates were seperated into different subfractions by FACS assay. The genomic aberration among each populations were compared by analysis of CGH data.
|
| |
|
| Overall design |
Genomic DNA were extracted from sorted cell population and CGH assay were performed to compare the similarity genomic abnormality among different cell groups.
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| |
|
| Contributor(s) |
Wang R, Tabar V |
| Citation(s) |
21102433 |
| |
| Submission date |
Sep 30, 2010 |
| Last update date |
Dec 06, 2012 |
| Contact name |
Viviane Tabar |
| E-mail(s) |
[email protected]
|
| Phone |
212-639-8249
|
| Organization name |
MSKCC
|
| Department |
neurosurgery
|
| Lab |
Viviane Tabar
|
| Street address |
411 east 67th street
|
| City |
new york |
| State/province |
NY |
| ZIP/Postal code |
10021 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL5477 |
Agilent-014950 Human Genome CGH Microarray 4x44K (Feature Number version) |
|
| Samples (14)
|
| GSM602527 |
CGH: FSCS sorted CD105+ cells from case62 |
| GSM602528 |
CGH: FSCS sorted CD133+/CD144- cells from case62 |
| GSM602529 |
CGH: FSCS sorted CD133-/CD144- cells from case62 |
| GSM602530 |
CGH: FSCS sorted CD133+/CD144+ cells from case62 |
| GSM602531 |
CGH: FSCS sorted CD105+ cells from case71 |
| GSM602532 |
CGH: FSCS sorted CD133+/CD144+ cells from case71 |
| GSM602533 |
CGH: FSCS sorted CD133+/CD144- cells from case71 |
| GSM602534 |
CGH: FSCS sorted CD133-/CD144+ cells from case71 |
| GSM602535 |
CGH: FSCS sorted CD133-/CD144- cells from case71 |
| GSM602536 |
CGH: FSCS sorted CD31+ cells from case71 |
| GSM602537 |
CGH: FSCS sorted CD133+/CD144- cells from case73 |
| GSM602538 |
CGH: FSCS sorted CD31+ cells from case73 |
| GSM602539 |
CGH: FSCS sorted CD133-/CD144+ cells from case73 |
| GSM602540 |
CGH: FSCS sorted CD105+ cells from case73 |
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| This SubSeries is part of SuperSeries: |
|
| Relations |
| BioProject |
PRJNA133497 |
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