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Series GSE24587 Query DataSets for GSE24587
Status Public on Mar 31, 2011
Title Epstein–Barr virus (EBV) Rta-mediated cell cycle arrest enables permissive replication of EBV and Kaposi’s sarcoma-associated herpesvirus in 293 cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Epstein-Barr virus (EBV) Rta is a latent-lytic molecular switch evolutionarily conserved in all gamma-herpesviruses. In previous studies, doxycycline-inducible Rta was shown to potently produce an irreversible G1 arrest followed by cellular senescence in 293 cells. Here, we demonstrate that in this system the inducible Rta not only reactivates resident genome of EBV but also that of Kaposi’s sarcoma-associated herpesvirus (KSHV), to similar efficiency. However, Rta-induced senescence program was terminated by the robust viral lytic cycle replication that eventually caused cell death. Furthermore, prior to the abrupt expression of immediate-early protein (EBV BZLF1 or KSHV RTA), Rta simultaneously down-regulates cell cycle activators (c-Myc, CDK6, CCND2) and up-regulates senescence-related genes (p21, 14-3-3s). Since Rta is a viral immediate-early transcriptional activator, it is envisioned that during the initial stage of viral reactivation, Rta may engage to modulate the host transcriptome, to halt cell cycle progression, and to maintain an ideal environment for manufacturing infectious virions.

This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series.
 
Contributor(s) Lin S, Chen Y, Tsai W, Chen Y, Ko Y
Citation(s) 21423768, 21918011
Submission date Oct 07, 2010
Last update date Jul 26, 2018
Contact name Su-Fang Lin
E-mail(s) [email protected]
Organization name National Health Research Institutes, Taiwan
Department NICR
Lab R2-1211
Street address No 35, Keyan Road, Zhunan Town
City Miaoli Conunty
ZIP/Postal code 35053
Country Taiwan
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (7)
GSM606063 Control, 293TetLuc, doxcycline 48 h, rep1
GSM606064 Control, 293TetLuc, doxcycline 48 h, rep2
GSM606065 293TetER doxycycline 48 h, rep1
This SuperSeries is composed of the following SubSeries:
GSE24585 Expression profiling of host genes modulated by Epstein-Barr virus (EBV) Rta in HEK293 cells
GSE24586 Expression profiling of host genes modulated by Epstein-Barr virus Rta in nasopharyngeal carcinoma cells
Relations
BioProject PRJNA132491

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE24587_RAW.tar 30.1 Mb (http)(custom) TAR (of CEL)

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