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| Status |
Public on Oct 20, 2011 |
| Title |
Expression analysis of Candida albicans WO-1 grown in glucose or xylose |
| Organism |
Candida albicans WO-1 |
| Experiment type |
Expression profiling by genome tiling array
|
| Summary |
Investigation of whole genome gene expression level changes in Candida albicans WO-1 grown aerobically in xylose, compared to the same strain grown aerobically in glucose.
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| Overall design |
A six array study using total RNA recovered from three separate cultures of Candida albicans WO-1 grown in glucose and three separate cultures of Candida albicans WO-1 grown in xylose. Each array measures the expression level of 373,067 probes (average probe length 55.2 +/- 4.0 nt) tiled across the Candida albicans WO-1 genome with a median spacing distance of 31 nt. During data processing, probes are filtered to include only those probes corresponding to annotated protein-coding genes.
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| |
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| Contributor(s) |
Wohlbach DJ, Gasch AP |
| Citation(s) |
21788494 |
| |
| Submission date |
Oct 21, 2010 |
| Last update date |
Mar 22, 2012 |
| Contact name |
Dana Jasmine Wohlbach |
| E-mail(s) |
[email protected]
|
| Organization name |
Dickinson College
|
| Department |
Biology
|
| Street address |
P.O. Box 1773
|
| City |
Carlisle |
| State/province |
PA |
| ZIP/Postal code |
17013 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL11083 |
Candida albicans 385K tiled array |
|
| Samples (6)
|
| GSM611325 |
Candida albicans Glucose Replicate 1 |
| GSM611326 |
Candida albicans Glucose Replicate 2 |
| GSM611327 |
Candida albicans Glucose Replicate 3 |
| GSM611328 |
Candida albicans Xylose Replicate 1 |
| GSM611329 |
Candida albicans Xylose Replicate 2 |
| GSM611330 |
Candida albicans Xylose Replicate 3 |
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| This SubSeries is part of SuperSeries: |
| GSE24858 |
Expression analysis of various fungi grown in glucose or xylose |
|
| Relations |
| BioProject |
PRJNA133411 |
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