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Status |
Public on Jun 24, 2011 |
Title |
Krüppel-like factor 4 regulates T cell function |
Organism |
Mus musculus |
Experiment type |
Expression profiling by array
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Summary |
Krüppel-like factor 4 (Klf4), a transcription factor mediating context-dependent activation or repression, plays a key role in maintaining pluripotency of stem cells and in regulating cell differentiation. However, the precise function of Klf4 in T cell development and differentiation is largely unknown. Here we showed that Klf4 was highly expressed in thymocyte subsets and mature T cells, and was rapidly down-regulated in mature T cells after activation. In T cell-specific Klf4 conditional knockout mice, we observed a modest reduction of thymocytes (27%). This was due partly to the loss of Klf4 repression of Cdkn1b expression in thymocytes resulting in decreased proliferation of DN thymocytes. Together, these findings identify Klf4 as a critical regulator in T cell development.
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Overall design |
Klf4fl/fl mice (Katz et al., 2002) were crossed with CD4-Cre mice (Lee et al., 2001) to generate Klf4fl/fl-CD4-Cre+ (Klf4 conditional knockout in T cells) and Klf4fl/fl-CD4-Cre- (control) mice. Mice used for experiments were between 8 and 10 weeks old. Total RNA was extracted from freshly isolated DP+SP4 thymocytes from 3 KO mice and 3 control mice. RNA samples were labeled and hybridized to Illumina Sentrix MouseRef-8 v2 bead arrays.
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Contributor(s) |
An J, Golech S, Klaewsongkram J, Zhang Y, Huston G, Wood III WH, Wersto RP, Becker KG, Swain SL, Weng N |
Citation(s) |
21685331 |
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Submission date |
Oct 21, 2010 |
Last update date |
Jun 22, 2020 |
Contact name |
Supriyo De |
Organization name |
NIA-IRP, NIH
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Department |
Laboratory of Genetics and Genomics
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Lab |
Computational Biology & Genomics Core
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Street address |
251 Bayview Blvd
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City |
Baltimore |
State/province |
Maryland |
ZIP/Postal code |
21224 |
Country |
USA |
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Platforms (1) |
GPL6885 |
Illumina MouseRef-8 v2.0 expression beadchip |
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Samples (6)
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Relations |
BioProject |
PRJNA132021 |
Supplementary file |
Size |
Download |
File type/resource |
GSE24880_RAW.tar |
3.1 Mb |
(http)(custom) |
TAR |
Processed data included within Sample table |
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