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Series GSE25464 Query DataSets for GSE25464
Status Public on Nov 06, 2016
Title KYSE (450, 520, 890, 960) cell lines
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary microRNA profiles in human esophageal squamous cell carcinoma cell lines
 
Overall design KYSE cell lines were maintained in Ham’s F-12/RPMI 1640 (Invitrogen, San Diego, CA) containing 5% fetal bovine serum at 37 ˚C in a fully-humidified 5% CO2 atmosphere. Total RNA was extracted by the acid guanidinium thiocyanate-phenol-chloroform method. According to manufacture’s instructions, 500 ng of total RNA was labeled with Hy5 and was hybridized on the Human miRNA Oligo chip for 16 hour at 32˚C. A Human miRNA Oligo chip was scanned using ProScanArray (PerkinElmer).
 
Contributor(s) Tsuchiya S
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Submission date Nov 18, 2010
Last update date Nov 06, 2016
Contact name Soken Tsuchiya
Organization name Kumamoto University
Street address 5-1 Oe-honmachi, Chuo-ku
City Kumamoto
ZIP/Postal code 862-0973
Country Japan
 
Platforms (1)
GPL10312 3D-Gene Human miRNA Oligo chip v12-1.00
Samples (4)
GSM625364 KYSE450
GSM625365 KYSE520
GSM625366 KYSE890
Relations
BioProject PRJNA134601

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25464_RAW.tar 370.0 Kb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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