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Series GSE256832

Query DataSets for GSE256832

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from whole organism (ENCSR032CWX)

Project

modENCODE

Organism

Caenorhabditis elegans

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

ChIP-seq of transgenic worms expressing C06A8.2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR032CWX/

Citation(s)

22955616

BioProject

PRJNA63463

Submission date

Feb 24, 2024

Last update date

Oct 24, 2024

Contact name

ENCODE DCC

E-mail(s)

[email protected]

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL13776

Illumina Genome Analyzer IIx (Caenorhabditis elegans)

Samples (2)

GSM8106633	TF ChIP-seq from whole organism (ENCLB335ZFJ)
GSM8106634	TF ChIP-seq from whole organism (ENCLB246CWG)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE256832_ENCFF014BSN_read-depth_normalized_signal_ce11.bigWig	9.6 Mb	(ftp)(http)	BIGWIG
GSE256832_ENCFF066KCS_optimal_IDR_thresholded_peaks_ce10.bigBed	108.3 Kb	(ftp)(http)	BIGBED
GSE256832_ENCFF083KOS_peaks_and_background_as_input_for_IDR_ce11.bigBed	1.2 Mb	(ftp)(http)	BIGBED
GSE256832_ENCFF273WIR_optimal_IDR_thresholded_peaks_ce10.bed.gz	34.9 Kb	(ftp)(http)	BED
GSE256832_ENCFF381NRD_optimal_IDR_thresholded_peaks_ce11.bigBed	108.0 Kb	(ftp)(http)	BIGBED
GSE256832_ENCFF399WNB_control_normalized_signal_ce10.bigWig	9.8 Mb	(ftp)(http)	BIGWIG
GSE256832_ENCFF429FTR_optimal_IDR_thresholded_peaks_ce11.bed.gz	34.8 Kb	(ftp)(http)	BED
GSE256832_ENCFF434XLB_peaks_and_background_as_input_for_IDR_ce10.bigBed	1.2 Mb	(ftp)(http)	BIGBED
GSE256832_ENCFF540BMM_peaks_and_background_as_input_for_IDR_ce10.bed.gz	761.0 Kb	(ftp)(http)	BED
GSE256832_ENCFF706YDS_signal_of_unique_reads_ce10.bigWig	9.6 Mb	(ftp)(http)	BIGWIG
GSE256832_ENCFF748VBG_peaks_and_background_as_input_for_IDR_ce11.bed.gz	761.2 Kb	(ftp)(http)	BED
GSE256832_ENCFF748WUN_control_normalized_signal_ce11.bigWig	9.8 Mb	(ftp)(http)	BIGWIG
GSE256832_ENCFF851AYE_signal_of_unique_reads_ce11.bigWig	9.6 Mb	(ftp)(http)	BIGWIG
GSE256832_ENCFF976APA_read-depth_normalized_signal_ce10.bigWig	9.6 Mb	(ftp)(http)	BIGWIG
GSE256832_RAW.tar	123.7 Mb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA