|
| Status |
Public on Dec 31, 2010 |
| Title |
Transcriptome Analysis of Wounding-Induced Root to Shoot Communication in Arabidopsis thaliana. |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
|
| Summary |
Comparison of gene expression between shoots of root-wounded seedlings and shoots of control seedlings in Arabidopsis. We identified wounding-induced early (30 min) and late (360 min) root to shoot responsive genes (RtS).
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| |
|
| Overall design |
Two-condition experiment, shoots of root-wounded seedlings vs. shoots of control seedlings. Biological replicates: 2 control replicates, 2 treated replicates. Technical replicate: Dyeswap
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| |
|
| Contributor(s) |
Hasegawa S, Nishiuchi T |
| Citation(s) |
21241326 |
| |
| Submission date |
Dec 30, 2010 |
| Last update date |
Dec 06, 2012 |
| Contact name |
Takumi Nishiuchi |
| E-mail(s) |
[email protected]
|
| Organization name |
Kanazawa University
|
| Street address |
13-1 Takaramachi
|
| City |
Kanazawa |
| ZIP/Postal code |
920-0934 |
| Country |
Japan |
| |
|
| Platforms (1) |
| GPL888 |
Agilent-011839 Arabidopsis 2 Oligo Microarray G4136A (Feature Number version) |
|
| Samples (8)
|
| GSM647453 |
Shoots of root-wounded seedling after 30 min replicate 1 |
| GSM647454 |
Shoots of root-wounded seedling after 30 min replicate 1 (Dye Swap) |
| GSM647455 |
Shoots of root-wounded seedling after 30 min replicate 2 |
| GSM647456 |
Shoots of root-wounded seedling after 30 min replicate 2 (Dye Swap) |
| GSM647457 |
Shoots of root-wounded seedling after 360 min replicate 1 |
| GSM647458 |
Shoots of root-wounded seedling after 360 min replicate 1 (Dye Swap) |
| GSM647459 |
Shoots of root-wounded seedling after 360 min replicate 2 |
| GSM647460 |
Shoots of root-wounded seedling after 360 min replicate 2 (Dye Swap) |
|
| Relations |
| BioProject |
PRJNA136901 |
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