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Series GSE267620 Query DataSets for GSE267620
Status Public on Oct 14, 2024
Title Urinary concentrations of phthalate and phthalate alternative metabolites and sperm DNA methylation: A multi-cohort and meta-analysis of men in preconception studies
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Phthalates are ubiquitous pollutants in the environment; however, the mechanisms of phthalate-associated reproductive disorders in men are not fully understood. The aim of this study is to investigate associations between urinary phthalate metabolite concentrations and sperm DNA methylation. The study was conducted on 697 men from three prospective pregnancy cohorts: Longitudinal Investigation of Fertility and the Environment (LIFE) Study, Sperm Environmental Epigenetics and Development Study (SEEDS), and Environment and Reproductive Health (EARTH) Study.
 
Overall design Eighteen phthalate and two phthalate alternative metabolites were quantified by mass spectrometry in preconception urinary samples and sperm DNA methylation was measured via Illumina EPIC Array (v1). Regional methylation analyses were conducted to identify cohort-specific loci associated with urinary phthalate metabolites.
Web link https://www.sciencedirect.com/science/article/pii/S0160412024006354
 
Contributor(s) Nowak K, Pilsner JR
Citation(s) 39393261
Submission date May 15, 2024
Last update date Oct 15, 2024
Contact name J.Richard Pilsner
E-mail(s) [email protected]
Organization name Wayne State University
Department Department of Obstetrics and Gynecology
Lab Pilsner Lab
Street address 275 E Hancock St
City Detroit
State/province MI
ZIP/Postal code 48201
Country USA
 
Platforms (1)
GPL29753 Illumina Infinium HumanMethylationEPIC BeadChip + immuno custom content
Samples (697)
GSM8270271 203219750111_R01C01
GSM8270272 203219750111_R02C01
GSM8270273 203219750111_R03C01
Relations
BioProject PRJNA1111946

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE267620_Processed_methylation_data_matrix_EARTH.txt.gz 1.1 Gb (ftp)(http) TXT
GSE267620_Processed_methylation_data_matrix_LIFE.txt.gz 2.0 Gb (ftp)(http) TXT
GSE267620_Processed_methylation_data_matrix_SEEDS.txt.gz 1022.5 Mb (ftp)(http) TXT
GSE267620_RAW.tar 9.6 Gb (http)(custom) TAR (of IDAT)

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