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Series GSE280851 Query DataSets for GSE280851
Status Public on Nov 02, 2024
Title SOX6 Gatekeeps Oligodendrocyte Maturation [CUT&RUN]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Cellular maturation is an adaptive process essential for tissue formation and function, yet distinct from the initial steps of differentiation and cell fate specification. Understanding the regulation of cell maturation may inform underlying mechanisms of disease or new approaches to regenerative medicine. In the central nervous system, failed generation of mature oligodendrocytes contributes to numerous diseases including multiple sclerosis. Here, we report a transcriptional mechanism that governs the timing of oligodendrocyte maturation. After differentiation, the transcription factor SOX6 redistributes from super enhancers in proliferating oligodendrocyte progenitor cells to cluster across specific gene bodies in immature oligodendrocytes. These sites exhibit extensive chromatin decondensation and transcription, which abruptly turns off upon maturation. Suppression of SOX6 deactivates these immaturity loci, resulting in rapid transition to mature myelinating oligodendrocytes. Cells harboring this immature oligodendrocyte SOX6 gene signature are specifically enriched in multiple sclerosis patient brains, suggesting that failed maturation contributes to disease pathology. Administration of a Sox6-targeting antisense oligonucleotide in postnatal mice drove precocious oligodendrocyte maturation. Our findings reveal that SOX6 governs oligodendrocyte maturation and that its targeting could inform therapeutic strategies for enhancing myelin regeneration in neurodevelopmental and neurodegenerative diseases.
 
Overall design CUT & RUN of pluripotent stem cell derived oligodendrocyte progenitor cells (OPCs) and oligodendrocytes (OLs)
 
Contributor(s) Zhan JJ, Cohn EF, Allan KC, Tesar PJ
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Submission date Nov 01, 2024
Last update date Nov 03, 2024
Contact name Paul Tesar
E-mail(s) [email protected]
Organization name Case Western Reserve University
Department Genetics & Genome Sciences
Street address 10900 Euclid Ave.
City Cleveland
State/province Ohio
ZIP/Postal code 44106
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (4)
GSM8606561 iPSC OPC, Input
GSM8606562 iPSC OPC, Sox6, CUT&RUN
GSM8606563 iPSC OL, Input
This SubSeries is part of SuperSeries:
GSE197319 SOX6 Gatekeeps Oligodendrocyte Maturation
Relations
BioProject PRJNA1180921

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE280851_RAW.tar 616.9 Mb (http)(custom) TAR (of BW, NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA

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