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Series GSE281151 Query DataSets for GSE281151
Status Public on Nov 22, 2024
Title Transient histone deacetylase inhibition induces cellular memory of gene expression and three-dimensional genome folding
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
Web link https://doi.org/10.1101/2024.11.21.624660
 
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Submission date Nov 05, 2024
Last update date Nov 23, 2024
Contact name Marco Di Stefano
E-mail(s) [email protected]
Organization name Institut de Génétique Humaine - CNRS / University of Edinburgh
Lab Giacomo Cavalli lab
Street address 141 rue de la Cardonille
City Montpellier
ZIP/Postal code 34396
Country France
 
Platforms (2)
GPL28330 DNBSEQ-T7 (Mus musculus)
GPL28457 DNBSEQ-G400 (Mus musculus)
Samples (99)
GSM8599120 ATAC-seq mESC DMSO control replicate 1
GSM8599121 ATAC-seq mESC DMSO control replicate 2
GSM8599122 ATAC-seq mESC TSA-treated replicate 1
This SuperSeries is composed of the following SubSeries:
GSE280486 A histone hyperacetylation pulse induces cellular memory of gene expression and 3-dimensional genome folding [ATAC-seq]
GSE280487 A histone hyperacetylation pulse induces cellular memory of gene expression and 3-dimensional genome folding [ChIP-seq]
GSE280488 A histone hyperacetylation pulse induces cellular memory of gene expression and 3-dimensional genome folding [RNA-seq]
Relations
BioProject PRJNA1182386

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE281151_RAW.tar 40.8 Gb (http)(custom) TAR (of BW, MCOOL, NARROWPEAK, TSV)
SRA Run SelectorHelp

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