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| Status |
Public on Nov 01, 2011 |
| Title |
Expression data from transgenic rice with anti-OsPDCD5 |
| Organism |
Oryza sativa |
| Experiment type |
Expression profiling by array
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| Summary |
Environmental stresses influence the growth of plants and the productivity of crops. Salinity is one of the most important abiotic stresses for agricultural crops. PCD is induced by various biotic and abiotic stresses in algae and higher plants, including high salinity treatment. OsPDCD5, an ortholog to mammalian-programmed cell death 5, is up-regulated under low temperature and NaCl treatments.
We found that the transgenic rice which constitutively expressed anti-OsPDCD5 increased salt stress tolerance in unique ways. By using the Rice Genome Microarray, we identiļ¬ed target genes that were regulated in transgenic rice plants by anti-OsPDCD5.
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| Overall design |
Leaf tissues of 2-week-old transgenic and nontransgenic seedlings (10 plants each) before 200mM NaCl treatment, 20mins and 3 hours after 200mM NaCl treatment, respectively, were selected.
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| Contributor(s) |
Yang M, Yang J |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Mar 28, 2011 |
| Last update date |
Dec 27, 2017 |
| Contact name |
Mengfei Yang |
| E-mail(s) |
[email protected]
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| Organization name |
Fudan university
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| Street address |
Handan Road 220
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| City |
shanghai |
| ZIP/Postal code |
200433 |
| Country |
China |
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| Platforms (1) |
| GPL2025 |
[Rice] Affymetrix Rice Genome Array |
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| Samples (6)
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| GSM698482 |
nontransgenic seedlings, normal conditions |
| GSM698483 |
nontransgenic seedlings, 20mins NaCl treatment |
| GSM698484 |
nontransgenic seedlings, 3 hours NaCl treatment |
| GSM698485 |
transgenic seedlings, normal conditions |
| GSM698486 |
transgenic seedlings, 20mins NaCl treatment |
| GSM698487 |
transgenic seedlings, 3 hours NaCl treatment |
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| Relations |
| BioProject |
PRJNA139653 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE28209_RAW.tar |
25.6 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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