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Series GSE29359 Query DataSets for GSE29359
Status Public on Dec 01, 2011
Title Analysis of p53 target genes in melanoma part 1
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Although mutations in p53 are infrequent in human melanoma, its function is abnormal. In this study, whole genome bead arrays were used to examine the expression of p53 target genes in extracts from 82 metastatic melanoma samples, compared to extracts derived from diploid human melanocytes, to provide a global assessment of aberrant p53 function.
 
Overall design Total RNA extracted from 82 tumour samples and 8 melanocyte cell lines was analysed. Metastatic melanomas were compared to melanocyte cell lines.
 
Contributor(s) Avery-Kiejda KA, Bowden NA, Kairupan C, Croft AJ, Ashton KA, Scurr LL, Talseth-Palmer BA, Rizos H, Zhang XD, Scott RJ, Hersey P
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Submission date May 17, 2011
Last update date Jan 18, 2013
Contact name Kelly Kiejda
E-mail(s) [email protected]
Organization name University of Newcastle
Street address HMRI
City New Lambton Heights
State/province NSW
ZIP/Postal code 2305
Country Australia
 
Platforms (1)
GPL6104 Illumina humanRef-8 v2.0 expression beadchip
Samples (90)
GSM725734 Melanocyte 1
GSM725735 Melanocyte 2
GSM725736 Melanocyte 3
This SubSeries is part of SuperSeries:
GSE29377 Analysis of p53 target genes in melanoma
Relations
BioProject PRJNA143001

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE29359_RAW.tar 3.4 Mb (http)(custom) TAR
GSE29359_non-normalized.txt.gz 12.3 Mb (ftp)(http) TXT
GSE29359_normalized.txt.gz 12.6 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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