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Series GSE29384 Query DataSets for GSE29384
Status Public on Apr 04, 2012
Title Tetracycline-Inducible Cyr61 effect on LN229 glioma cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Glioblastoma multiforme is the most common and aggressive form of brain cancer. The use of oncolytic HSV-1 (oHSV) to selectively target brain cancer cells leading to their lytic destruction has shown to be very promising in a preclinical setting, but is lacking efficacy in clinical trials. Cyr61, a secreted extracellular matrix protein which functions to promote angiogenesis, migration, proliferation and tumorigenesis, was found to be upregulated rapidly following oHSV infection. Here we show, using microarray analysis, that Cyr61 expression leads to the induction of several genes with type 1 interferon function. We show that Cyr61 mediated type 1 IFN induction is through its interaction with integrin alpha6beta1 on the cell surface and results in oHSV inhibition, reducing the efficacy of this therapy.
We used microarray to detail the global program of gene expression underlying Cyr61 mediated oncolytic HSV-1 inhibition and identified distinct classes of up-regulated genes during this process.
 
Overall design Tetracycline-Inducible glioma cells expressing Cyr61 protein in the presence of doxycycline were treated with or without doxycycline for 24 hours. RNA was extracted and hybridized on Affymetrix microarray. Two groups: ± dox to induce cyr61, performed in triplicate.
 
Contributor(s) Haseley A, Yu L, Kaur B
Citation(s) 22282654
Submission date May 18, 2011
Last update date Mar 25, 2019
Contact name Amy Haseley
E-mail(s) [email protected]
Organization name The Ohio State University
Department Neurological Surgery
Street address 400 W. 12th Ave. 370CCC
City Columbus
State/province OH
ZIP/Postal code 43210
Country USA
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (6)
GSM726287 Tetracycline-inducible glioma cells dox 1
GSM726288 Tetracycline-inducible glioma cells dox 2
GSM726289 Tetracycline-inducible glioma cells dox 3
Relations
BioProject PRJNA140027

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE29384_RAW.tar 30.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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