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| Status |
Public on Dec 12, 2011 |
| Title |
Revealing novel transcribed sequences absent from the human reference genome by RNA-Seq |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
These two transcriptome sequencing datasets were generated from two reference RNA samples established by the US FDA-led MicroArray Quality Control project with Illumina next-generation sequencing technology. The reference RNA sample A (UHRR, Catalog #740000) consists of total RNA extracted from 10 human cell lines of various origins: Blymphocyte, brain, breast, cervix, liposarcoma, liver, macrophage, skin, testis and Tlymphocyte. Equal quantities of DNAase-treated total RNA from each cell line were pooled to generate the UHRR. The reference RNA sample B (HBRR, Catalog #6050) consists of total RNA extracted from several regions of the brains from 23 adult donors.
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| Overall design |
Investigation of the completeness of human reference genome [SEQC Consortium].
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| |
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| Citation(s) |
22140575 |
| |
| Submission date |
Jun 27, 2011 |
| Last update date |
May 15, 2019 |
| Contact name |
Tieliu Shi |
| E-mail(s) |
[email protected]
|
| Phone |
86-21-54345020
|
| Fax |
86-21-54344922
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| Organization name |
East China Normal University
|
| Department |
The Institute of Biomedical Sciences
|
| Lab |
Center for Bioinformatics and Computational Biology
|
| Street address |
Dongchuan Road 500
|
| City |
Shanghai |
| ZIP/Postal code |
200241 |
| Country |
China |
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| Platforms (1) |
| GPL9115 |
Illumina Genome Analyzer II (Homo sapiens) |
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| Samples (2) |
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| This SubSeries is part of SuperSeries: |
| GSE30222 |
RNA-seq of brain and various cell lines |
|
| Relations |
| BioProject |
PRJNA155141 |
