|
| Status |
Public on Dec 31, 2013 |
| Title |
Transcription profiling of Basmati T-DNA insertional mutant lines |
| Platform organism |
Oryza sativa |
| Sample organism |
Oryza sativa Indica Group |
| Experiment type |
Expression profiling by array
|
| Summary |
The aim of this study was to look for the changes at the transcriptome level caused by the same T-DNA cassette in three mutants of Basmati 370 with different phenotypes. The comparative analysis of differentially expressed genes was conducted individually and collectively for all three mutants.
|
| |
|
| Overall design |
RNA from Basmati mutants OsPE, Osoc and Ossl grown under optimal conditions were analyzed in two different biological replications (A and B) making total six samples.
|
| |
|
| Contributor(s) |
Paul P, Awasthi A, Rai AK, Gupta SK, Prasad R, Dhaliwal HS, Sharma TR |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Aug 08, 2011 |
| Last update date |
Dec 27, 2017 |
| Contact name |
Anjali Awasthi |
| E-mail(s) |
[email protected]
|
| URL |
http://www.iitr.ac.in/departments/BT/pages/index.html
|
| Organization name |
Indian Institute of Technology Roorkee
|
| Department |
Biotechnology
|
| Lab |
Plant Molecular Biology
|
| Street address |
Department of Biotechnology
|
| City |
Roorkee |
| State/province |
Uttarakhand |
| ZIP/Postal code |
247667 |
| Country |
India |
| |
|
| Platforms (1) |
| GPL2025 |
[Rice] Affymetrix Rice Genome Array |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA146057 |
Less...
More...