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Series GSE31849 Query DataSets for GSE31849
Status Public on Sep 08, 2011
Title Genome-wide activity-dependent MeCP2 phosphorylation regulates nervous system development and function [cultured cortical neurons]
Organism Mus musculus
Experiment type Expression profiling by array
Summary To examine potential differences in activity-dependent gene expression, we analyzed mRNA expression in cultured neurons isolated from Wild-type vs MeCP2 S421A mice at 0 (unstimulated), 1 or 6 hours after membrane depolarization by exposure to high extracellular KCl (55mM)
All mice were male littermates from one of three litters.
 
Overall design We isolated RNA from dissociated cortical cultures (E16+7DIV) isolated from Wild-Type or MeCP2 S421A knock-in mice littermates. Cells were either left unstimulated or depolarized for 1 or 6 hours by addition of 55mM KCl to the media. mRNA expression was analyzed using the Affymetrix GeneChip Mouse Expression Set 430 2.0 microarray platform.
 
Contributor(s) Cohen S, Hemberg M, Hutchinson AN, Sadacca LA, Ebert DH, Harmin DA, Greenberg RS, Zhou Z, Wetsel WC, West AE, Gabel HW, Greenberg ME
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Submission date Sep 02, 2011
Last update date Feb 11, 2019
Contact name Harrison Wren Gabel
E-mail(s) [email protected]
Phone 617-512-0289
Organization name Harvard Medical School
Department Neurobiology
Lab Michael Greenberg
Street address 7 Linden St Apt 3
City Brookline
State/province MA
ZIP/Postal code 02445
Country USA
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (18)
GSM789948 unstim_WT_RepA_sc1
GSM789949 unstim_S421A_RepA_sc2
GSM789950 1hrKCl_WT_RepA_sc3
This SubSeries is part of SuperSeries:
GSE31851 Genome-wide activity-dependent MeCP2 phosphorylation regulates nervous system development and function
Relations
BioProject PRJNA155259

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31849_RAW.tar 78.8 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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