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Series GSE3302 Query DataSets for GSE3302
Status Public on Jul 26, 2006
Title Fetal lung development
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary Fetal lung development is a complex biological process, which involves temporal and spatial regulations of many genes. To understand molecular mechanisms of this process, we investigated gene expression profiling of lungs at gestational day 18, 19, 20, 21, new born, and adult rats using in-house rat DNA microarray containing 6,000 known genes and 4,000 ESTs. 1,512 genes passed SAM test and 583 genes (402 known genes and 181 ESTs) had a 2-fold change at least at one time point. K-means cluster analysis revealed 7 major expression patterns. Furthermore, using GeneMapp, we identified 3 regulatory pathways: TGF beta signaling pathway, cell cycle, and G-protein signaling; and 2 metabolism pathways: proteasome degradation and glycolysis. Our results suggest a complex regulatory pathway for fetal lung development.
Keywords: Time course
 
Overall design Loop Design as following: D18-D19-D20-D21-NB-AD-D18
 
Contributor(s) Weng T, Chen Z, Liu L
Citation(s) 16798779
Submission date Sep 13, 2005
Last update date Jan 18, 2013
Contact name Tingting Weng
E-mail(s) [email protected]
Phone 4057443348
Fax 4057448263
URL http://www.lungmicroarray.org
Organization name Oklahoma State University
Department Physiological Sciences
Lab Lung biology and toxicology
Street address 264 McElroy Hall
City Stillwater
State/province OK
ZIP/Postal code 74078
Country USA
 
Platforms (1)
GPL1699 MWG rat 10k oligo set
Samples (54)
GSM74251 TAD_T18
GSM74252 T21_TNB
GSM74253 T19_T20
Relations
BioProject PRJNA92813

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary data files not provided

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