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Series GSE33433 Query DataSets for GSE33433
Status Public on Sep 01, 2012
Title Comparison of mouse epithelial tumor initiating cells to mesenchymal tumor initiating cells generated by EMT
Organism Mus musculus
Experiment type Expression profiling by array
Summary The differentiation of stem-like cells of tumors may contribute to the cellular heterogeneity of breast cancers. We report the propagation of highly enriched mouse mammary cancer stem cells that retain the potential to differentiate both in vivo and in culture and their use to identify chemical compounds that influence both self-renewal and differentiation. We identify epithelial tumor initiating cells (ETIC) that expresses lineage markers of both basal and luminal mammary cell lineages and retains the potential to generate heterogeneous tumors similar to the tumor of origin from even single cells. ETIC can progress through a Rho associated coil-coil protein kinase 1 (ROCK1) dependent, epithelial to mesenchymal transition to generate a second cell type capable of initiating tumors of limited heterogeneity. The propagation of ETIC will increase the opportunities for identifying new therapeutic compounds that may inhibit or prevent progression of some types of breast cancer. These data compare the gene expression pattern of ETIC and MTIC.
 
Overall design Total RNA obtained from ETIC and MTIC cells, allowing the comparison of gene expression patterns and the selection of potential targets.
 
Contributor(s) Castro D, Maurer J, Oshima R
Citation(s) 22961723
Submission date Nov 03, 2011
Last update date Jun 14, 2018
Contact name Roy M Williams
E-mail(s) [email protected]
Organization name The Scripps Research Institute
Department Regenerative Medicine
Lab Loring
Street address 3030 Science Park Road
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platforms (1)
GPL6885 Illumina MouseRef-8 v2.0 expression beadchip
Samples (8)
GSM826903 WMG300 MTIC-1
GSM826904 WMG300 MTIC-2
GSM826905 WMG316 ETIC-1
Relations
BioProject PRJNA148683

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33433_RAW.tar 3.1 Mb (http)(custom) TAR
GSE33433_non-normalized.txt.gz 1.9 Mb (ftp)(http) TXT
Processed data included within Sample table

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