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Series GSE34223 Query DataSets for GSE34223
Status Public on May 18, 2012
Title microRNA expression analysis of circulating monocytes in obese patients
Platform organisms Homo sapiens; Mus musculus; Rattus norvegicus; Human alphaherpesvirus 1; Human alphaherpesvirus 2; Human betaherpesvirus 5; human gammaherpesvirus 4; JC polyomavirus; Human immunodeficiency virus 1; Murid gammaherpesvirus 4; Human gammaherpesvirus 8; Merkel cell polyomavirus; Mus musculus cytomegalovirus 2; Betapolyomavirus hominis; Betapolyomavirus macacae
Sample organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary Low-grade chronic inflammation plays an important role in the development of obesity and obesity-associated disorders such as insulin resistance, type 2 diabetes, the metabolic syndrome and atherosclerosis. One possible link between obesity and inflammation is the enhanced activation of circulating monocytes making them more prone to infiltration into the adipose and vascular tissues of obese persons. microRNAs are a class of small endogenous non-coding RNAs, which function as important regulators of inflammation by modulating gene expression. Therefore, microRNA analysis of circulating monocytes from control and obese patients will potentially provide insights into the pathophysiology of obesity and associated disorders and supply biomarkers for diagnostic purpose. The cohort comprised 6 lean age-matched controls (BMI: 20±0.8 kg/m2, mean±SEM) and 9 obese individuals without clinical symptoms of cardiovascular disease (BMI: 46±1.5 kg/m2, P<0.001 compared with lean controls). CD14+ monocytes were collected, total RNA was extracted and subjected to microRNA expression analysis.
 
Overall design Samples consisted of CD14+ monocytes from 6 lean controls and 9 morbidly obese patients.
 
Contributor(s) Hulsmans M, Holvoet P
Citation(s) 22535975
Submission date Dec 07, 2011
Last update date May 18, 2012
Contact name Paul Holvoet
E-mail(s) [email protected]
URL http://www.kuleuven.be/amu
Organization name K.U.Leuven
Department Department of Cardiovascular Diseases
Lab Atherosclerosis and Metabolism Unit
Street address Herestraat 49, PB 705
City Leuven
ZIP/Postal code 3000
Country Belgium
 
Platforms (1)
GPL11432 miRCURY LNA microRNA Array, 5th generation - hsa, mmu & rno
Samples (15)
GSM844835 Monocyte_lean_rep1
GSM844836 Monocyte_lean_rep2
GSM844837 Monocyte_lean_rep3
Relations
BioProject PRJNA149775

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Supplementary file Size Download File type/resource
GSE34223_RAW.tar 24.4 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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