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GEO accession:
Series GSE34996
Query DataSets for GSE34996
Status
Public on Feb 20, 2012
Title
Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins
Organism
Homo sapiens
Experiment type
Expression profiling by array
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
22574288
Submission date
Jan 10, 2012
Last update date
May 15, 2019
Contact name
Gene Yeo
E-mail(s)
[email protected]
Organization name
UCSD
Street address
2880 Torrey Pines Scenic Dr. Room 3805/Yeo Lab
City
La Jolla
State/province
CA
ZIP/Postal code
92037
Country
USA
Platforms (4)
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GPL9052
Illumina Genome Analyzer (Homo sapiens)
GPL9115
Illumina Genome Analyzer II (Homo sapiens)
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
GPL15106
[hjay] Affymetrix GeneChip Human HJAY Array
Samples (67)
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GSM859957
hnRNPA1 293T splicing array 1
GSM859958
hnRNPA1 293T splicing array 2
GSM859959
hnRNPA1 293T splicing array 3
GSM859960
hnRNPF 293T splicing array 1
GSM859961
hnRNPF 293T splicing array 2
GSM859962
hnRNPF 293T splicing array 3
GSM859963
hnRNPM 293T splicing array 1
GSM859964
hnRNPM 293T splicing array 2
GSM859965
hnRNPM 293T splicing array 3
GSM859966
hnRNPU 293T splicing array 1
GSM859967
hnRNPU 293T splicing array 2
GSM859968
hnRNPU 293T splicing array 3
GSM859969
control 293T splicing array 1
GSM859970
control 293T splicing array 2
GSM859971
control 293T splicing array 3
GSM859972
hnRNPA2B1 293T splicing array 1
GSM859973
hnRNPA2B1 293T splicing array 2
GSM859974
hnRNPA2B1 293T splicing array 3
GSM859975
hnRNPH1 293T splicing array 1
GSM859976
hnRNPH1 293T splicing array 2
GSM859977
hnRNPH1 293T splicing array 3
GSM859978
hnRNPA1 293T CLIPseq 1
GSM859979
hnRNPA1 293T CLIPseq 2
GSM859980
hnRNPA1 293T CLIPseq 3
GSM859981
hnRNPA1 293T CLIPseq 4
GSM859982
hnRNPA2B1 293T CLIPseq 1
GSM859983
hnRNPF 293T CLIPseq 1
GSM859984
hnRNPF 293T CLIPseq 2
GSM859985
hnRNPF 293T CLIPseq 3
GSM859986
hnRNPF 293T CLIPseq 4
GSM859987
hnRNPM 293T CLIPseq 1
GSM859988
hnRNPM 293T CLIPseq 2
GSM859989
hnRNPU 293T CLIPseq 1
GSM859990
hnRNPU 293T CLIPseq 2
GSM859991
hnRNPU 293T CLIPseq 3
GSM859992
hnRNPU 293T CLIPseq 4
GSM859993
hnRNPA1 293T RNAseq KD1a
GSM859994
hnRNPA1 293T RNAseq KD2a
GSM859995
hnRNPA1 293T RNAseq KD3a
GSM859996
hnRNPA1 293T RNAseq KD3b
GSM859998
hnRNPA1 293T RNAseq KD3c
GSM859999
hnRNPA1 293T RNAseq KD3d
GSM860001
hnRNPA2B1 293T RNAseq KD1a
GSM860004
hnRNPA2B1 293T RNAseq KD2a
GSM860007
hnRNPF 293T RNAseq KD1a
GSM860009
hnRNPF 293T RNAseq KD1b
GSM860011
hnRNPF 293T RNAseq KD2a
GSM860012
hnRNPF 293T RNAseq KD2b
GSM860013
hnRNPF 293T RNAseq KD2c
GSM860014
hnRNPH1 293T RNAseq KD1a
GSM860015
hnRNPH1 293T RNAseq KD2a
GSM860016
hnRNPM 293T RNAseq KD1a
GSM860017
hnRNPM 293T RNAseq KD1b
GSM860018
hnRNPM 293T RNAseq KD1c
GSM860019
hnRNPM 293T RNAseq KD1d
GSM860020
hnRNPM 293T RNAseq KD2a
GSM860021
hnRNPM 293T RNAseq KD2b
GSM860022
hnRNPU 293T RNAseq KD1a
GSM860023
hnRNPU 293T RNAseq KD1b
GSM860024
hnRNPU 293T RNAseq KD2a
GSM860025
hnRNPU 293T RNAseq KD2b
GSM860026
control 293T RNAseq 1
GSM860027
control 293T RNAseq 2
GSM860028
control 293T RNAseq 3
GSM860029
control 293T RNAseq 4
GSM860030
control 293T RNAseq 5
GSM860031
control 293T RNAseq 6
This SuperSeries is composed of the following SubSeries:
GSE34992
Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins (splicing arrays)
GSE34993
Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins (CLIP-Seq)
GSE34995
Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins (RNA-Seq)
Relations
BioProject
PRJNA151077
Download family
Format
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Supplementary file
Size
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File type/resource
GSE34996_RAW.tar
32.2 Gb
(http)
(custom)
TAR (of BOWTIE, CEL)
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