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Series GSE35938 Query DataSets for GSE35938
Status Public on Dec 01, 2012
Title Transcriptome analysis of the Salmonella enterica OmpR regulon
Platform organism Salmonella enterica
Sample organism Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Experiment type Expression profiling by array
Summary Transcriptional profiling of Salmonella Typhimurium SL1344 wild type and ompR mutant grown to mil-exponential phase in LB. The goal was to define the ompR-regulated genes.
 
Overall design Two strains (wild type, ompR mutant), 4 biological replicates of each. Each sample was hybridised in a two-channel hybridization against Salmonella genomic DNA as the comparator/reference, which also acted as a control for spot quality.
 
Contributor(s) Rowley G, Hinton J
Citation(s) 23190111
Submission date Feb 20, 2012
Last update date Mar 04, 2013
Contact name Gary Rowley
E-mail(s) [email protected]
Organization name University of East Anglia
Department School of Biological Sciences
Street address Norwich Research Park
City norwich
ZIP/Postal code NR4 7TJ
Country United Kingdom
 
Platforms (1)
GPL5780 IFR_Salmonella_7.3k_v1.0
Samples (8)
GSM877790 Wild type in LB, replicate 1
GSM877791 Wild type in LB, replicate 2
GSM877792 Wild type in LB, replicate 3
Relations
BioProject PRJNA152083

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35938_RAW.tar 5.1 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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