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Series GSE40697 Query DataSets for GSE40697
Status Public on Sep 07, 2012
Title Studies on the Mechanism of Telavancin Decreased Susceptibility in a Laboratory-Derived Mutant
Organism Staphylococcus aureus
Experiment type Expression profiling by array
Summary Telavancin is a novel semi-synthetic lipoglycopeptide derivative of vancomycin with a dual mode of action. This study sought to understand knowledge of mechanisms of decreased susceptibility in laboratory-derived mutant. There were multiple significant changes in the transcriptome of TlvDSMED1952 indicating an altered overall physiology of the strain, likely decreased virulence, and changes in cell wall and membrane properties, probably due to multiple genetic changes in the strain.
 
Overall design MHB cultures (biological replicates: N=3) were then grown to exponential phase (OD600=0.4). Dye-swapping was performed between samples.
 
Contributor(s) Song Y
Citation(s) 23551248
Submission date Sep 07, 2012
Last update date Aug 23, 2019
Contact name Arunachalam Muthaiyan, Brian Wilkinson
E-mail(s) [email protected], [email protected]
Phone 309-438-7244
URL http://www.bio.ilstu.edu/Wilkinson/
Organization name Illinois State University
Department Biological Sciences
Lab Microbiology
Street address Julian Hall
City Normal
State/province IL
ZIP/Postal code 61790
Country USA
 
Platforms (1)
GPL10591 JCVI PFGRC Staphylococcus aureus 16K v9 array designed primarily based on strain COL
Samples (3)
GSM999268 telavancin resistant strain vs. parent strain-rep1
GSM999269 telavancin resistant strain vs. parent strain-rep2
GSM999270 telavancin resistant strain vs. parent strain-rep3
Relations
BioProject PRJNA174632

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40697_RAW.tar 2.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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