NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE42478 Query DataSets for GSE42478
Status Public on Dec 20, 2012
Title Defining a molecular roadmap of cellular reprogramming into iPS cells
Platform organisms Homo sapiens; Mus musculus; Rattus norvegicus; Human alphaherpesvirus 1; Human alphaherpesvirus 2; Human betaherpesvirus 5; Murid betaherpesvirus 1; human gammaherpesvirus 4; JC polyomavirus; Human immunodeficiency virus 1; Murid gammaherpesvirus 4; Human gammaherpesvirus 8; Merkel cell polyomavirus; Betapolyomavirus hominis; Betapolyomavirus macacae
Sample organism Mus musculus
Experiment type Expression profiling by array
Non-coding RNA profiling by array
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by genome tiling array
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 23260147
Submission date Nov 23, 2012
Last update date May 15, 2019
Contact name Ben S. Wittner
E-mail(s) [email protected]
Organization name Massachusetts General Hospital
Department Center for Cancer Research
Lab Lawrence
Street address 149 13th Street
City Boston
State/province MA
ZIP/Postal code 02129
Country USA
 
Platforms (5)
GPL8321 [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array
GPL8759 [HT_MG-430A] Affymetrix HT Mouse Genome 430A Array
GPL10283 Nimblegen Mouse 25K MM5_HELP_Promoter array
Samples (61)
GSM1038591 KH2-MEF_m2 [mRNA]
GSM1038592 KH2-MEF_m3 [mRNA]
GSM1038593 Day3_Thy+ M2 [mRNA]
This SuperSeries is composed of the following SubSeries:
GSE42379 Defining a molecular roadmap of cellular reprogramming into iPS cells [mRNA profiling]
GSE42475 Defining a molecular roadmap of cellular reprogramming into iPS cells [miRNA profiling]
GSE42477 Defining a molecular roadmap of cellular reprogramming into iPS cells [ChIP-Seq]
Relations
BioProject PRJNA182083

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42478_RAW.tar 6.4 Gb (http)(custom) TAR (of BIGWIG, CEL, PAIR, TXT)
SRA Run SelectorHelp
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap