NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE42618 Query DataSets for GSE42618
Status Public on Feb 09, 2017
Title pp71-stimulated genes in U87 stable cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Glioblastoma multiforme (GBM) is a highly malignant primary central nervous neoplasm characterized by tumor cell invasion, robust angiogenesis, and a mean survival of 15 months. Human cytomegalovirus (HCMV) infection is present in > 90% of GBMs, although the role the virus plays in GBM pathogenesis is unclear. We report here that a majority of human GBM tumors express HCMV pp71, which has previously been found to promote cell cycle progression and viral replication, and that pp71 is expressed preferentially within the CD133+ cancer stem cell-like subpopulation. Overexpression of pp71 in adult neural precursor cells (NPCs) resulted in a dramatic induction of stem cell factor (SCF) gene expression, which has been identified as an important pro-angiogenic factor in GBM.
We further demonstrate that pp71 induces a pro-inflammatory response via NFΚB activation, which drives SCF upregulation. In summary, we show for the first time that HCMV pp71 is expressed in a majority of human GBMs and that pp71 activates NFΚB signaling, resulting in increased expression and secretion of SCF, an important paracrine modulator of GBM angiogenesis.
 
Overall design U87 GBM cells were transduced with either pLXSN-pp71 or pLXSN empty vector retroviruses and selected with G418 for selection of stable cells. Total RNA was isolated from both cell lines and hybridized to Affymetric microarrays. The fold change in expression for all cellular genes in pp71 stable cell lines versus the empty vector control was then calculated.
 
Contributor(s) Matlaf LA, Soroceanu L
Citation(s) 23861869
Submission date Nov 29, 2012
Last update date Jul 26, 2018
Contact name Saleena Ghanny
E-mail(s) [email protected]
Organization name Rutgers University
Street address 185 South Orange Ave
City Newark
ZIP/Postal code 07103
Country USA
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (2)
GSM1045861 U87 LXSN
GSM1045862 U87 LXSN-pp71
Relations
BioProject PRJNA182364

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42618_RAW.tar 8.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap