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| Status |
Public on Jun 30, 2013 |
| Title |
Expression analysis of 3T3 cells that express Arabidopsis-derived Diaminopimelate Decarboxylase (DDC) in response to growth on meso-2,6-diaminopimelic acid (DAP) versus L-Lysine |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
|
| Summary |
This experiment aimed to investigate whether cells that express the L-Lysine-producing enzyme DDC exhibit any mRNA changes when grown on precursor DAP relative to L-Lysine.
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| |
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| Overall design |
Total RNA obtained from DDC-expressing 3T3 cells after 3 days in culture with amino acid precursor DAP, L-Lysine, or starved of both.
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| |
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| Contributor(s) |
Gauthier NP, Soufi B, Walkowicz WE, Pedicord VA, Mavrakis KJ, Macek B, Gin DY, Sander C, Miller ML |
| Citation(s) |
23817070 |
| |
| Submission date |
Jan 30, 2013 |
| Last update date |
Jun 14, 2018 |
| Contact name |
Nicholas Gauthier |
| Organization name |
MSKCC
|
| Street address |
1275 York Avenue, Box #460
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10065 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL6885 |
Illumina MouseRef-8 v2.0 expression beadchip |
|
| Samples (9)
|
| GSM1074101 |
DDC-expressing 3T3 cells in L-Lysine Rep1 |
| GSM1074102 |
DDC-expressing 3T3 cells in L-Lysine Rep2 |
| GSM1074103 |
DDC-expressing 3T3 cells in L-Lysine Rep3 |
| GSM1074104 |
DDC-expressing 3T3 cells in D-Lysine Rep1 |
| GSM1074105 |
DDC-expressing 3T3 cells in D-Lysine Rep2 |
| GSM1074106 |
DDC-expressing 3T3 cells in D-Lysine Rep3 |
| GSM1074107 |
DDC-expressing 3T3 cells starved Rep1 |
| GSM1074108 |
DDC-expressing 3T3 cells starved Rep2 |
| GSM1074109 |
DDC-expressing 3T3 cells starved Rep3 |
|
| Relations |
| BioProject |
PRJNA188076 |
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