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Series GSE44312 Query DataSets for GSE44312
Status Public on May 23, 2013
Title Gene expression is a circular process
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary This study involves the role of yeast mRNA decay factors in transcription. The experiment included here are the ChIP-exo results of three decay factors: Xrn1, Dcp2 & Lsm1.
 
Overall design Four experiments were made: Xrn1, Dcp2, Lsm1 and control (no-TAP tag), in two replicates.
 
Contributor(s) Haimovich G, Garber M, Choder M
Citation(s) 23706738
Submission date Feb 13, 2013
Last update date May 15, 2019
Contact name Gal Haimovich
E-mail(s) [email protected]
Organization name Weizmann Institute of Science
Department Dept. Molecular Genetics
Lab Jeffrey Gerst
Street address Belfer bldg. 416
City Rehovot
ZIP/Postal code 7610001
Country Israel
 
Platforms (1)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (4)
GSM1082950 Xrn1-TAP
GSM1082951 Dcp2-TAP
GSM1082952 Lsm1-TAP
Relations
BioProject PRJNA189422
SRA SRP018648

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44312_RAW.tar 820.0 Kb (http)(custom) TAR (of BEDGRAPH, TAB, WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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