|
| Status |
Public on Jun 01, 2013 |
| Title |
To study gene expression by xylose fermenting strains in the presence and absence of furfural |
| Organism |
Saccharomyces cerevisiae |
| Experiment type |
Expression profiling by array
|
| Summary |
The main objective is to develop a strain tolerant to furfural for ethanol production from lignocellulosic hydrolysates. We compare gene expressions among three genetically modified S. cerevisiae (control, TAL-expressing and TAL-ADH expressing strain) under the presence and absence of furfural.
|
| |
|
| Overall design |
Samples for 3 strains (control, TAL-expressing and TAL-ADH expressing strain) were taken after 6h of exposure to furfural. Furfural concentration were 0 and 70 mM. Each samples were duplicated resulting in total of 12 samples.
|
| |
|
| Contributor(s) |
Hasunuma T, Nambu Y, Syahidah K, Ismail K, Kondo A |
| Citation(s) |
23916856 |
| |
| Submission date |
Mar 19, 2013 |
| Last update date |
Sep 01, 2013 |
| Contact name |
Akihiko Kondo |
| Organization name |
Kobe University
|
| Department |
Chemical Science and Engineering
|
| Street address |
1-1 Rokkodai, Nada
|
| City |
Kobe |
| ZIP/Postal code |
657-8501 |
| Country |
Japan |
| |
|
| Platforms (1) |
| GPL9294 |
Agilent-015072 Yeast Oligo Microarray 4x44K G2519F (Probe Name version) |
|
| Samples (12)
|
| GSM1100510 |
control strain 70 mM furfural Run 2 |
| GSM1100511 |
TAL-expressing strain 0 mM furfural Run 1 |
| GSM1100512 |
TAL-expressing 0 mM furfural Run 2 |
| GSM1100513 |
TAL-expressing strain 70 mM furfural Run 1 |
| GSM1100514 |
TAL-expressing strain 70 mM furfural Run 2 |
| GSM1100515 |
TAL/ADH co-expressing strain 0 mM furfural Run 1 |
| GSM1100516 |
TAL/ADH co-expressing strain 0 mM furfural Run 2 |
| GSM1100517 |
TAL/ADH co-expressing strain 70 mM furfural Run 1 |
| GSM1100518 |
TAL/ADH co-expressing strain 70 mM furfural Run 2 |
|
| Relations |
| BioProject |
PRJNA193391 |
Less...
More...