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Series GSE49512 Query DataSets for GSE49512
Status Public on Jun 11, 2014
Title Genome-wide nucleosome maps for wild type and Rsc8-depleted Saccharomyces cerevisiae
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Paired-end sequencing study of nucleosomes from MNase-digested nuclei.
 
Overall design Nucleosomal DNA from wild type and Rsc8-depleted cells was subjected to paired-end sequencing.
 
Contributor(s) Ganguli D, Cole HA, Clark DJ
Citation(s) 25015381
Submission date Aug 02, 2013
Last update date May 15, 2019
Contact name David Johannes Clark
E-mail(s) [email protected]
Phone 3014966966
Organization name NICHD, NIH
Department DDB
Lab SCGE
Street address 6 Center Drive Bldg 6A Rm 2A02
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (2)
GPL9377 Illumina Genome Analyzer II (Saccharomyces cerevisiae)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (8)
GSM1200250 Rsc8-depleted - nucleosomes
GSM1200251 Rsc8-depleted - nucleosomes 1100U
GSM1200252 Rsc8-depleted - nucleosomes 1300U
Relations
BioProject PRJNA214089
SRA SRP028411

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Supplementary file Size Download File type/resource
GSE49512_RAW.tar 243.6 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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