|
| Status |
Public on Dec 29, 2007 |
| Title |
Clostridium acetobutylicum ATCC 824 butanol stress (50 mM) |
| Platform organism |
Clostridium acetobutylicum ATCC 824 |
| Sample organism |
Clostridium acetobutylicum |
| Experiment type |
Expression profiling by array
|
| Summary |
Metabolite accumulation has pleiotropic, including toxic, effects on cellular physiology, but such effects are not well understood at the genomic level. Using DNA microarrays, the Clostridium acetobutylicum transcriptional stress response to butanol was analyzed.
Keywords: stress response
|
| |
|
| Overall design |
RNA samples were taken from both butanol challenged (50 mM) and unchallenged bottles at 10, 30, 45, 60 (1h), 120 (2h), 360 (6h), 720 (12h), and 1440 min (24h) poststress. Two slides per timepoint were hybridized on a dye swap configuration, except for the 720 min. point where both slides have the same dye configuration.
|
| |
|
| Contributor(s) |
Alsaker KV, Paredes CJ, Papoutsakis ET |
| Citation(s) |
19998280 |
| |
| Submission date |
Jun 06, 2006 |
| Last update date |
Mar 17, 2012 |
| Contact name |
Eleftherios Terry Papoutsakis |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Delaware
|
| Department |
Chemical Engineering
|
| Street address |
15 Innovation Way
|
| City |
Newark |
| State/province |
DE |
| ZIP/Postal code |
19711 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL3820 |
NU C. acetobutylicum ATCC 824 13 K whole genome spotted cDNA array |
|
| Samples (22)
|
|
| This SubSeries is part of SuperSeries: |
| GSE5020 |
Metabolite stress in Clostridium acetobutylicum ATCC 824 |
|
| Relations |
| BioProject |
PRJNA104491 |
Less...
More...