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Series GSE50587 Query DataSets for GSE50587
Status Public on Jun 01, 2014
Title H3K27me3 and H3K4me2 profiles along the length of the X chromosome in trophoblast stem (TS) cells and Extra-embryonic endoderm stem cells (XEN), ChIP-chip
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by genome tiling array
Summary This analysis includes H3K27me3 and H3K4me2 profiles along the length of the X-chromosome in male (F2) and female (F3) TS cells and in male (GHP7/7) and female (GHP7/9) XEN cells.
 
Overall design Analysis of H3K27me3 and H3K4me2 profiles in four different cell populations. Two independent biological replicates for each cell population are provided. The array includes approx. 162,5 Mb of the X chromosome and approx. 14,6 Mb of chromosome 17 as a control.
 
Contributor(s) Merzouk S, Dubois A, Navarro P, Avner PR, Morey C
Citation(s) 25053977
Submission date Sep 04, 2013
Last update date May 05, 2015
Contact name Celine Morey
E-mail(s) [email protected]
Phone +33 1 57278930
Organization name UMR7216-Epigenetics and stem cell
Department University Paris 7
Lab Non-coding RNAs, differentiation and development
Street address 35 rue Hélène Brion
City Paris
ZIP/Postal code 75013
Country France
 
Platforms (1)
GPL14676 RIMB/Wutz laboratory Mus musculus 385K Tiling array [2007-01-30_chrXs_2.aw]
Samples (14)
GSM1224047 F2_H3K27me3_rep1
GSM1224048 F2_H3K27me3_rep2
GSM1224049 F3_H3K27me3_rep1
Relations
BioProject PRJNA217988

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE50587_RAW.tar 187.5 Mb (http)(custom) TAR (of PAIR)
Processed data included within Sample table

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