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| Status |
Public on Jun 27, 2006 |
| Title |
Cotton Fibre/Non Fibre |
| Organism |
Gossypium hirsutum |
| Experiment type |
Expression profiling by array
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| Summary |
0dpa Fibre vs epidermal laser capture microdisection comparison
Keywords: Development
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| Overall design |
Total RNA was isolated from each cell type (fibre initial or non-fibre epidermal pavement cell) from both Plant 1 and Plant 2. Hence, there were two biological replicates of each cell-type. Sub-samples of each cell type, designated here as technical replicates, were taken as separate batches of cells from different groups of ovules, but each from the same pair of plants. In particular, there were four sub-samples of fibre initial cells from plant 1 and two from plant 2 and two sub-samples of non-fibre epidermal from plant 1 and four from plant 2. The complete experiment involved three dye-swap pairs using a total of 6 arrays.
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| Contributor(s) |
Wu Y, Llewellyn DJ |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Jun 23, 2006 |
| Last update date |
Sep 26, 2014 |
| Contact name |
Andrew Spriggs |
| E-mail(s) |
[email protected]
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| Phone |
612-6246-5193
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| Organization name |
CSIRO Plant Industry
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| Department |
Bioinformatics Group
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| Street address |
GPO Box 1600
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| City |
Canberra |
| State/province |
ACT |
| ZIP/Postal code |
2601 |
| Country |
Australia |
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| Platforms (1) |
| GPL3035 |
Cotton Ovule cDNA MicroArray ghA |
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| Samples (6)
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| GSM115957 |
Fibre Initial Cells (c.v. Deltapine 16) F/NF, ghA86scan1.gpr |
| GSM115958 |
Fibre Initial Cells (c.v. Deltapine 16) F/NF, ghA87scan1.gpr |
| GSM115959 |
Fibre Initial Cells (c.v. Deltapine 16) F/NF, ghA88scan1.gpr |
| GSM115960 |
Fibre Initial Cells (c.v. Deltapine 16) F/NF, ghA89scan1.gpr |
| GSM115961 |
Fibre Initial Cells (c.v. Deltapine 16) F/NF, ghA90scan1.gpr |
| GSM115962 |
Fibre Initial Cells (c.v. Deltapine 16) F/NF, ghA91scan1.gpr |
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| Relations |
| BioProject |
PRJNA96641 |
| Supplementary data files not provided |
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