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Series GSE51713 Query DataSets for GSE51713
Status Public on Nov 14, 2014
Title Genome-wide map of H3K4me3 binding sites by ChIP-seq in human lymphoblastoid cell lines treated with doxorubicin
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We have used chromatin immune-precipitation with parallel sequencing (ChIP-Seq) technology to identify genome-wide H3K4me3 binding in human lymphoblastoid cell lines treated with a DNA-damaging chemotherapeutic reagent doxorubicin.
 
Overall design ChIP-Seq analysis of H3K4me3 binding sites in human lymphoblastoid cells treated with Doxorubicin or vehicle
 
Contributor(s) Su D, Wang X, Bell DA
Citation(s) 25569532
Submission date Oct 25, 2013
Last update date May 15, 2019
Contact name Xuting Wang
E-mail(s) [email protected]
Phone 9842873840
Organization name NIEHS/NIH
Street address 111 TW Alexander Dr
City Research Triangle Park
State/province NC
ZIP/Postal code 27709
Country USA
 
Platforms (1)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (2)
GSM1251005 H3K4me3 ChIP LCL Doxo
GSM1251006 H3K4me3 ChIP LCL NT
This SubSeries is part of SuperSeries:
GSE51714 p53 activation effect on GM12878 lymphoblastoid cells
Relations
BioProject PRJNA224699
SRA SRP031909

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE51713_RAW.tar 520.0 Kb (http)(custom) TAR (of NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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