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Series GSE52867 Query DataSets for GSE52867
Status Public on Dec 03, 2013
Title Plasmodium falciparum NF54 Transcriptome
Organism Plasmodium falciparum NF54
Experiment type Expression profiling by high throughput sequencing
Summary Transcriptomic Analysis of Cultured Sporozoites of P. falciparum
 
Overall design RNA-seq reads from each of three developmental stages (2 replicates per sample) were mapped to the reference Plasmodium falciparum genome, and gene expression levels were calculated for each sample.
 
Contributor(s) Caler E, Hoffman SL, Kirkness EF, Town CD
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Submission date Dec 02, 2013
Last update date May 15, 2019
Contact name Ewen F Kirkness
E-mail(s) [email protected]
Organization name JCVI
Street address 9704 Medical Center Drive
City Rockville
State/province Maryland
ZIP/Postal code 20850
Country USA
 
Platforms (1)
GPL18008 Illumina HiSeq 2000 (Plasmodium falciparum NF54)
Samples (6)
GSM1277288 Sporozoites 1
GSM1277289 Sporozoites 2
GSM1277290 Cultured sporozoites 1
Relations
BioProject PRJNA230379
SRA SRP033414

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE52867_RAW.tar 360.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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