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Series GSE55512 Query DataSets for GSE55512
Status Public on Mar 04, 2014
Title Gene-expression profiles of ovarian cancer regarding its microenvironment
Organism Homo sapiens
Experiment type Expression profiling by array
Summary PD-L1 suppresses host immunity and promotes tumor growth. We investigated how IFN-γ regulates PD-L1 in the ovarian cancer microenvironment. In clinical samples, the number of stromal CTLs in peritoneally disseminated tumors was correlated with PD-L1 expression on the tumor cells, and the lymphocyte number was significantly related to the IFN-γ signature score. In mouse models, PD-L1 was induced in peritoneal disseminated tumors, where lymphocytes were prominent, but not in subcutaneous tumors. Depleting IFNGR1 resulted in lower PD-L1 expression and longer survival in peritoneal dissemination model. Injection of IFN-γ into subcutaneous tumors increased PD-L1 expression and tumor size, and PD-L1 depletion abrogated tumor growth. These data suggest that IFN-γ works as a tumor progressor through PD-L1 induction. The source of IFN-γ in ovarian cancer microenvironment and its biological effect to the tumor cells is unclear. The immortalized human ovarian surface epithelial cell line, HOSE-E7/hTERT (HOSE) was treated with IFN-γ and expression microarray analysis was performed, and probes showing significantly higher values in IFN-γ-added group were termed “IFN-γ signature genes (295 probes)”. We then applied this signature to our ovarian cancer microarray data, which included 75 ovarian cancer clinical samples, by means of ss-GSEA. IFN-γ signature score was strongly correlated to the number of infiltrating CD4-positive or CD8-positive lymphocytes in the tumors. These data suggest that the IFN-γ in the ovarian cancer microenvironment is derived from lymphocytes, and an IFN-γ-rich microenvironment is strongly correlated to a lymphocyte-rich microenvironment.
 
Overall design Genome-wide transcriptional changes in human ovarian cancer tissue were observed in different tumor immunological microenvironment.
 
Contributor(s) Abiko K, Matsumura N
Citation(s) 25867264, 35552285
Submission date Mar 03, 2014
Last update date Aug 02, 2022
Contact name Kaoru Abiko
E-mail(s) [email protected]
Organization name Kyoto University Graduate School of Medicine
Department Department of Gynecology and Obstetrics
Street address 54 Shogoin Kawaharacho, Sakyo-ku
City Kyoto
ZIP/Postal code 606-8507
Country Japan
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (12)
GSM1338404 KOVB5_1
GSM1338405 KOVB5_2
GSM1338406 KOVB5_3
Relations
BioProject PRJNA239911

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE55512_RAW.tar 57.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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