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Series GSE55873 Query DataSets for GSE55873
Status Public on Oct 01, 2014
Title Bovine Day 15 Extra-embryonic membrane (EEM): Male and Female Control vs. Male and Female CSF2 Methylation
Organism Bos taurus
Experiment type Methylation profiling by genome tiling array
Summary We aimed to study the effects of CSF2 treatment on the methylome of the Day 15 female and male embryo.
 
Overall design Methylomic profiling of bovine extra-embryonic membrane at Day 15 post-insemination produced by IVF. Oocytes were matured and fertilized in vitro using a single Holstein bull. After 5 days in vitro culture, the embryos were either treated with 10 ng/ml bovine recombinant CSF2 or the Control (DPBS/BSA) until Day 7. At Day 7, the embryos were transferred into recipients. At day 15 following insemination, embryos were flushed and collected for total RNA and gDNA extraction. The gender of the embryos were determined by PCR prior to microarray analysis. CSF2 males were compared to Control males while CSF2 females were compared to Control females
 
Contributor(s) Dobbs KB, Gagne D, Fournier E, Sirard M, Robert C, Hansen PJ
Citation(s) 25078682
Submission date Mar 13, 2014
Last update date Oct 01, 2014
Contact name Kyle Dobbs
E-mail(s) [email protected]
Organization name University of Florida
Department Animal Sciences
Street address 2250 SW Shealy Drive
City Gainesville
State/province Florida
ZIP/Postal code 32611
Country USA
 
Platforms (1)
GPL18384 EmbryoGENE DNA Methylation Array Bovine 2x400K v2.0
Samples (5)
GSM1347849 Male CSF2 vs Control Rep. 1
GSM1347850 Male CSF2 vs Control Rep. 2
GSM1347851 Female CSF2 vs Control Rep. 1
Relations
BioProject PRJNA241182

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE55873_RAW.tar 118.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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