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Series GSE567 Query DataSets for GSE567
Status Public on Dec 25, 2003
Title Essential Thrombocythemia (ET) vs Normal (baseline) Megakaryocytes
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Essential Thrombocythemia (ET) patients, as well as normal donors BM CD34+ cells were differentiated in thrombopoietin-treated liquid suspension cultures. Briefly, CD34+ cells (80,000 /mL) were resuspended in a serum-free medium in the presence of 100 ng/mL of human recombinant thrombopoietin (TPO; Genzyme, Boston, MA). Every 3 days, viable cells were scored by Trypan blue dye exclusion and cultures were amplified with fresh serum-free medium. Each well was then supplemented with 100 ng/mL TPO. After 14 to 16 days of liquid culture, CD34-derived megakaryocytes (MKs) were purified by means of an anti-CD41a monoclonal antibody (MoAb) (Dako, Milan, Italy) directed against the glycoproteic alpha2B-beta3 complex and immunobeads (MPC 450 Dynabeads; Dynal, Oslo, Norway). The purity of MKs was determined for each isolation by indirect immunofluorescence, using an anti-CD41b MoAb which reacts with a different epitope of alpha2B-beta3 subunit (Immunotech Inc., Westbrook, ME), followed by a goat anti-mouse IgG, covalently linked to fluorescein (Becton Dickinson, San Jose, CA).
Keywords: other
 
 
Contributor(s) Tenedini E, Fagioli M, Vianelli N, Tagliafico E, Poli M, Gugliotta L, Martinelli G, Tura S, Baccarani M, Ferrari S, Catani L
Citation(s) 15271793
Submission date Jul 30, 2003
Last update date Aug 10, 2018
Contact name Enrico Tagliafico
E-mail(s) [email protected]
Organization name University of Modena and Reggio Emilia
Department Center for Genome Research
Street address Via Campi 287
City Modena
State/province MO
ZIP/Postal code 41126
Country Italy
 
Platforms (1)
GPL96 [HG-U133A] Affymetrix Human Genome U133A Array
Samples (2)
GSM8649 Normal Megakaryocytes
GSM8650 Essential Thrombocythemia (ET) Megakaryocytes
Relations
BioProject PRJNA85337

Essential Thrombocythemia (ET) vs Normal (baseline) Megakaryocytes header descriptions
ID_REF
VALUE Affymetrix MAS 5.0 Signal Log Ratio (vs baseline)
Change Affymetrix MAS 5.0 Change (vs baseline)

Data table
ID_REF VALUE Change
AFFX-BioB-5_at 0.1 NC
AFFX-BioB-M_at -0.1 NC
AFFX-BioB-3_at 0.1 NC
AFFX-BioC-5_at 0.1 NC
AFFX-BioC-3_at 0.2 I
AFFX-BioDn-5_at 0.4 NC
AFFX-BioDn-3_at 0.1 NC
AFFX-CreX-5_at 0 NC
AFFX-CreX-3_at 0 NC
AFFX-DapX-5_at 1.4 NC
AFFX-DapX-M_at 0.7 NC
AFFX-DapX-3_at -1 NC
AFFX-LysX-5_at 0.4 NC
AFFX-LysX-M_at -2.8 NC
AFFX-LysX-3_at -0.1 NC
AFFX-PheX-5_at 1.6 NC
AFFX-PheX-M_at -2.1 NC
AFFX-PheX-3_at -3.4 NC
AFFX-ThrX-5_at -0.7 NC
AFFX-ThrX-M_at 1.6 NC

Total number of rows: 22283

Table truncated, full table size 392 Kbytes.




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