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Series GSE60390 Query DataSets for GSE60390
Status Public on Sep 18, 2014
Title PROX1 ChIP-seq analysis of human colorectal cancer cells SW480R
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We performed ChIP-seq data in SW480R cells.
 
Overall design Pools of three independent ChIP experiments and input DNA were used for sequencing.
 
Contributor(s) Petrova TV, Zangger N, Delorenzi M, Ragusa S
Citation(s) 25242332
Submission date Aug 13, 2014
Last update date May 15, 2019
Contact name Nadine Fournier
E-mail(s) [email protected]
Organization name Agora Cancer Research Center & Swiss Institute of Bioinformatics
Lab Translational Data Science Facility
Street address Agora Cancer Research Center, Bugon 25A
City Lausanne
State/province Vaud
ZIP/Postal code 1000
Country Switzerland
 
Platforms (1)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
Samples (2)
GSM1477597 PROX1_ChIPSEQ
GSM1477598 Input DNA
Relations
BioProject PRJNA258163
SRA SRP045479

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60390_RAW.tar 290.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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