GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE62726
Query DataSets for GSE62726
Status
Public on Nov 21, 2014
Title
Targeting of Super-Enhancer-Associated Oncogenic Transcription in MYCN-driven tumor cells by CDK7 inhibition
Organism
Homo sapiens
Experiment type
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
25416950
Submission date
Oct 27, 2014
Last update date
May 15, 2019
Contact name
Rani George
E-mail(s)
[email protected]
Phone
617-632-5281
Organization name
Dana Farber Cancer Institute
Department
Pediatric Oncology
Lab
Rani George Lab
Street address
450 Brookline Ave
City
Boston
State/province
MA
ZIP/Postal code
02115
Country
USA
Platforms (2)
GPL9052
Illumina Genome Analyzer (Homo sapiens)
GPL16043
GeneChip® PrimeView™ Human Gene Expression Array (with External spike-in RNAs)
Samples (46)
Less...
More...
GSM1532373
high-MYCN-rep1_kelly_DMSO
GSM1532374
high-MYCN-rep2_kelly_DMSO
GSM1532375
high-MYCN-rep3_kelly_DMSO
GSM1532376
high-MYCN-rep1_kelly_THZ1
GSM1532377
high-MYCN-rep2_kelly_THZ1
GSM1532378
high-MYCN-rep3_kelly_THZ1
GSM1532379
high-MYCN-rep1_IMR32_DMSO
GSM1532380
high-MYCN-rep2_IMR32_DMSO
GSM1532381
high-MYCN-rep3_IMR32_DMSO
GSM1532382
high-MYCN-rep1_IMR32_THZ1
GSM1532383
high-MYCN-rep2_IMR32_THZ1
GSM1532384
high-MYCN-rep3_IMR32_THZ1
GSM1532385
low-MYCN-rep1_SHSY5Y_DMSO
GSM1532386
low-MYCN-rep2_SHSY5Y_DMSO
GSM1532387
low-MYCN-rep3_SHSY5Y_DMSO
GSM1532388
low-MYCN-rep1_SHSY5Y_THZ1
GSM1532389
low-MYCN-rep2_SHSY5Y_THZ1
GSM1532390
low-MYCN-rep3_SHSY5Y_THZ1
GSM1532391
high-MYCN-rep1_kelly_ActD
GSM1532392
high-MYCN-rep2_kelly_ActD
GSM1532393
high-MYCN-rep1_kelly_shGFP
GSM1532394
high-MYCN-rep2_kelly_shGFP
GSM1532395
high-MYCN-rep1_kelly_shMYCN
GSM1532396
high-MYCN-rep2_kelly_shMYCN
GSM1532397
overexpressing-MYCN-rep1_SHSY5Y
GSM1532398
overexpressing-MYCN-rep2_SHSY5Y
GSM1532399
overexpressing-MYCN-rep1_SHSY5Y_THZ1
GSM1532400
overexpressing-MYCN-rep2_SHSY5Y_THZ1
GSM1532401
H3K27ac ChIP-seq_kelly_DMSO
GSM1532402
H3K4me1 ChIP-seq_kelly_DMSO
GSM1532403
Input DNA_kelly_1_DMSO
GSM1532404
Input DNA_kelly_2_DMSO
GSM1532405
Pol_II ChIP-seq_kelly_DMSO
GSM1532406
Input DNA_kelly_THZ1
GSM1532407
Pol_II ChIP-seq_kelly_THZ1
GSM1532408
H3K27ac ChIP-seq_SHSY5Y_DMSO
GSM1532409
H3K4me1 ChIP-seq_SHSY5Y_DMSO
GSM1532410
Input DNA_SHSY5Y_DMSO
GSM1532411
Pol_II ChIP-seq_SHSY5Y_DMSO
GSM1532412
Input DNA_SHSY5Y_THZ1
GSM1532413
Pol_II ChIP-seq_SHSY5Y_THZ1
GSM1532414
H3K27ac ChIP-seq_NB1
GSM1532415
H3K27ac ChIP-seq_NB2
GSM1532416
Input DNA_NB2
GSM1532417
H3K27ac ChIP-seq_NB3
GSM1532418
Input DNA_NB3
This SuperSeries is composed of the following SubSeries:
GSE62724
Targeting of Super-Enhancer-Associated Oncogenic Transcription in MYCN-driven tumor cells by CDK7 inhibition [Gene Expression]
GSE62725
Targeting of Super-Enhancer-Associated Oncogenic Transcription in MYCN-driven tumor cells by CDK7 inhibition [ChIP-Seq]
Relations
BioProject
PRJNA264968
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE62726_RAW.tar
65.0 Mb
(http)
(custom)
TAR (of BED, CEL)
SRA Run Selector
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|