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| Status |
Public on Jan 06, 2015 |
| Title |
Genome-wide identification of Bacillus subtilis Zur-binding sites. |
| Organism |
Bacillus subtilis subsp. subtilis str. 168 |
| Experiment type |
Genome binding/occupancy profiling by genome tiling array
|
| Summary |
The transcriptional factor Zur plays a key role in regulating zinc homeostasis in Bacillus subtilis.
The genomic sites bound by Zur were mapped using a chromatine immunoprecipitation approach. This allowed the identification of 80 inter- and intragenic chromosomal sites bound by Zur.
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| Overall design |
This data set contains 2 samples. Immunoprecipitated (IP) DNA from Bacillus subtilis BSAS36 strain (BSB1, a tryptophan-prototrophic derivative 168 strain expressing a SPA-tagged Zur protein) were extracted from bacterial cells in the exponential growth phase. IP and whole-cell extract DNA were hybridized on tiling array to generate ChIP-on-chip profiles. Two biological replicates were anlyzed.
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| Contributor(s) |
Auger S, Prestel E, Noirot P |
| Citation(s) |
25649915 |
| |
| Submission date |
Jan 05, 2015 |
| Last update date |
Apr 09, 2015 |
| Contact name |
Sandrine Auger |
| E-mail(s) |
[email protected]
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| Phone |
33 1 34 65 25 22
|
| Organization name |
INRA
|
| Lab |
MICALIS
|
| Street address |
INRA-Domaine de Vilvert
|
| City |
Jouy-en-Josas |
| ZIP/Postal code |
F-78350 |
| Country |
France |
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| Platforms (1) |
| GPL13168 |
BaSysBio Bacillus subtilis T2 385K array [090325_CBS_DTU_Bsub_T2] |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA271606 |
