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Series GSE67738 Query DataSets for GSE67738
Status Public on Apr 10, 2015
Title Salivary Transcriptomic Biomarkers for Insulin Resistance
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We have performed gene expression microarray analysis to profile transcriptomic signatures between insulin resistance high risk subjects and insulin resistance low risk subjects
 
Overall design Participants enrolled in this study were recruited in the overnight fasted state, then the collection and processing of glucose (fasting, 30, 60 and 120 minutes) and insulin from blood samples, hemoglobin A1c (HbA1c) , assessment of medical history, socio-demographic characteristics, lifestyle factors, blood pressure and anthropometric and body composition measurements were conducted. During baseline visit, participants were asked to refrain from eating, drinking and oral hygiene procedures for at least 1-hour prior to saliva collection.5 ml of unstimulated whole saliva samples were consistently collected, stabilized and preserved, the sample supernatants were reserved at -80°C prior to assay. Based on the homeostasis model assessment of insulin resistance (HOMA-IR), using the formula [HOMA-IR= (fasting glucose*fasting insulin)/405], participants were divided into 2 groups: IR high risk group (HOMA-IR value ≥2.5) and IR low risk group (HOMA-IR value <2.5). Total RNA was extracted from saliva and subjected to gene expression microarray analysis using Affymetrix human genome 2.0 plus array
 
Contributor(s) Zhang Y, Grogan TR, Joshipura KJ, Elashoff D, Wong DW
Citation(s) 28802700
Submission date Apr 09, 2015
Last update date May 30, 2019
Contact name yong zhang
E-mail(s) [email protected]
Phone 3109901061
Organization name UCLA
Department school of dentistry
Lab David T. Wong
Street address 650 Charles E. Young Drive South
City Los Angeles
State/province CA
ZIP/Postal code 90034
Country USA
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (38)
GSM1655009 insulin resistane low risk sample 1
GSM1655010 insulin resistane high risk sample 1
GSM1655011 insulin resistane low risk sample 2
Relations
BioProject PRJNA280775

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE67738_RAW.tar 157.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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