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Series GSE6928 Query DataSets for GSE6928
Status Public on Apr 15, 2007
Title Stonewalling Drosophila stem cell differentiation by epigenetic controls
Organism Drosophila melanogaster
Experiment type Expression profiling by array
Summary Abstract: During Drosophila oogenesis, germline stem cell (GSC) identity is maintained largely by preventing the expression of factors that promote differentiation. This is accomplished via the activity of several genes acting either in the GSC or its niche. The translational repressors, Nanos and Pumilio, act in GSCs to prevent differentiation, likely by inhibiting translation of early differentiation factors, while niche signals prevent differentiation by silencing transcription of the differentiation factor Bam. We have found that the DNA-associated protein Stonewall (Stwl) is also required for GSC maintenance. stwl is required cell-autonomously; clones of stwl- germ cells were lost by differentiation, and ectopic Stwl caused an expansion of GSCs. stwl mutants acted as Suppressors of Variegation, indicating stwl normally acts in chromatin-dependent gene repression. In contrast to several previously described GSC maintenance factors, Stwl likely functions epigenetically to prevent GSC differentiation. Stwl-dependent transcriptional repression does not target bam, but rather Stwl represses the expression of many genes, including those that may be targeted by Nanos/Pumilio translational inhibition.
Keywords: Genetic modification; gene chip hybridization (Affymetrix Drosophila Genome 2.0)
 
Overall design Genetic variation comparison between germ cells of Drosophila ovaries from bam mutant and stwl bam double mutant females. Six total samples were analyzed, with each genotype performed in triplicates.
 
Contributor(s) Maines JZ, Park JK, Williams M, McKeain DM
Citation(s) 17344229
Submission date Jan 31, 2007
Last update date Aug 28, 2018
Contact name Dennis McKearin
Phone 214-648-4944
Organization name UT Southwestern Med. Ctr.
Department Molecular Biology
Street address 6000 Harry Hines Blvd., NA5.214
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platforms (1)
GPL1322 [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array
Samples (6)
GSM159285 Drosophila_bam86_rep1
GSM159286 Drosophila_bam86_rep2
GSM159287 Drosophila_bam86_rep3
Relations
BioProject PRJNA99355

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Supplementary file Size Download File type/resource
GSE6928_RAW.tar 19.8 Mb (http)(custom) TAR (of CEL)

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