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| Status |
Public on May 24, 2016 |
| Title |
Transcriptomics of Neisseria gonorrhoeae |
| Organism |
Neisseria gonorrhoeae NCCP11945 |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
The overall goals and objectives of this study are to investigate the transcriptomics of Neisseria gonorrhoeae using RNA-seq. This work will look at gene expression, start points of transcription, transcriptional termination, and differences between these in different conditions and between strains and growing cultures over time.
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| Overall design |
The starting baseline for this study is Neisseria gonorrhoeae strain NCCP11945, minimally passaged since it was genome sequenced, grown at 37C in 5% CO2. All other experiments would be based off of this, both in terms of number of samples and replicates.
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| Contributor(s) |
Snyder LA, Roberts SB |
| Citation(s) |
27681925 |
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Russell Spencer-Smith, Sabrina Roberts, Neesha Gurung, Lori A. S. Snyder. DNA uptake sequences in Neisseria gonorrhoeae as intrinsic transcriptional terminators and markers of horizontal gene transfer. Microbial Genomics 2016 2. doi: 10.1099/mgen.0.000069
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| Submission date |
Sep 15, 2015 |
| Last update date |
Jul 15, 2019 |
| Contact name |
Lori A.S. Snyder |
| E-mail(s) |
[email protected]
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| Organization name |
Kingston University
|
| Department |
School of Life Sciences, Pharmacy, and Chemistry
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| Street address |
Penrhyn Road
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| City |
Kingston upon Thames |
| ZIP/Postal code |
KT1 2EE |
| Country |
United Kingdom |
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| Platforms (1) |
| GPL20920 |
Ion Torrent PGM (Neisseria gonorrhoeae NCCP11945) |
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| Samples (1) |
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| Relations |
| BioProject |
PRJNA296013 |
| SRA |
SRP063842 |
