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| Status |
Public on Dec 01, 2015 |
| Title |
The impact of anaerobiosis on expression of the iron-responsive Fur and RyhB Regulons [expression microarray] |
| Organism |
Escherichia coli str. K-12 substr. MG1655 |
| Experiment type |
Expression profiling by genome tiling array
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| Summary |
As descirbed in the manuscript "The impact of anaerobiosis on expression of the iron-responsive Fur and RyhB Regulons" we profiled the gene expression of E. coli K12 during aerobic or anaerobic growth and in the presence or absence of the transcription factor Fur and/or the small RNA RyhB.
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| Overall design |
We performed tiling microarray analyses to reveal the expression profiles of wild-type E. coli K12 or E. coli K12 lacking the transcription factor Fur and/or the small RNA RyhB during aerobic or ananerobic growth.
Please note that the *PAIR.pair files contain the complete normalized data ('PM' column; 389,307 data rows including controls) while the sample data tables contain 378,238 rows (without control values)
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| Contributor(s) |
Beauchene NA, Myers KS, Chung D, Park DM, Weisnicht AM, Keles S, Kiley PJ |
| Citation(s) |
26670385 |
| |
| Submission date |
Nov 12, 2015 |
| Last update date |
Dec 17, 2015 |
| Contact name |
Patricia J Kiley |
| E-mail(s) |
[email protected]
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| Organization name |
University of Wisconsin - Madison
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| Department |
Biomolecular Chemistry
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| Street address |
420 Henry Mall, Room 1135 Biochemistry Building
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| City |
Madison |
| State/province |
WI |
| ZIP/Postal code |
53706 |
| Country |
USA |
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| Platforms (1) |
| GPL8708 |
UW-Madison Escherichia coli K-12 MG1655 tiling array (YD Design) |
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| Samples (14)
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| This SubSeries is part of SuperSeries: |
| GSE74933 |
The impact of anaerobiosis on expression of the iron-responsive Fur and RyhB Regulons |
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| Relations |
| BioProject |
PRJNA301960 |
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