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GEO accession:
Series GSE76058
Query DataSets for GSE76058
Status
Public on Feb 12, 2016
Title
m1A marks translation initiation sites in human and mouse messenger RNA
Organisms
Schizosaccharomyces pombe
;
Saccharomyces cerevisiae
;
Homo sapiens
;
Mus musculus
Experiment type
Expression profiling by array
Expression profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
26863196
Submission date
Dec 16, 2015
Last update date
May 15, 2019
Contact name
Sharon Moshitch-Moshkovitz
E-mail(s)
[email protected]
Organization name
Sheba Medical Center
Department
Cancer Research Center
Street address
Laboratory wing
City
Tel-Hashomer
ZIP/Postal code
52621
Country
Israel
Platforms (5)
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GPL11154
Illumina HiSeq 2000 (Homo sapiens)
GPL13112
Illumina HiSeq 2000 (Mus musculus)
GPL13821
Illumina HiSeq 2000 (Saccharomyces cerevisiae)
GPL13988
Illumina HiSeq 2000 (Schizosaccharomyces pombe)
GPL15207
[PrimeView] Affymetrix Human Gene Expression Array
Samples (52)
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GSM1782888
HeLa mRNA IP replicate A
GSM1782889
HeLa mRNA input replicate A
GSM1782890
HeLa mRNA IP replicate B
GSM1782891
HeLa mRNA input replicate B
GSM1782892
HEPG2 total RNA rearranged at 50c IP
GSM1782893
HEPG2 total RNA rearranged at 50c input
GSM1782894
HEPG2 total RNA rearranged at 60c IP
GSM1782895
HEPG2 total RNA rearranged at 60c input
GSM1782896
HEPG2 total RNA Untreated IP competitive elution
GSM1782897
HEPG2 total RNA Untreated input competitive elution
GSM1782898
HEK293 total RNA IP replicate A
GSM1782899
HEK293 total RNA input replicate A
GSM1782900
HEK293 total RNA IP replicate B
GSM1782901
HEK293 total RNA input replicate B
GSM1782902
mouse liver total RNA IP replicate A
GSM1782903
mouse liver total RNA input replicate A
GSM1782904
mouse liver total RNA IP replicate B
GSM1782905
mouse liver total RNA input replicate B
GSM1782906
mouse embryonic fibroblasts IP replicate A
GSM1782907
mouse embryonic fibroblasts input replicate A
GSM1782908
mouse embronic stem cells IP replicate A
GSM1782909
mouse embronic stem cells input replicate A
GSM1782910
HepG2 PARSseq S1 replicate A
GSM1782911
HepG2 PARSseq S1 replicate B
GSM1782912
HepG2 PARSseq V1 replicate A
GSM1782913
HepG2 PARSseq V1 replicate B
GSM1972519
HEPG2 mRNA untreated IP replicate B
GSM1972520
HEPG2 mRNA untreated input replicate B
GSM1972521
HEPG2 mRNA untreated IP replicate C
GSM1972522
HEPG2 mRNA untreated input replicate C
GSM1972523
HEPG2 mRNA untreated IP replicate D
GSM1972524
HEPG2 mRNA untreated input replicate D
GSM1972525
HEPG2 mRNA untreated IP replicate E
GSM1972526
HEPG2 mRNA untreated input replicate E
GSM1972527
HEPG2 mRNA Glucose starvation 4h IP replicate A
GSM1972528
HEPG2 mRNA Glucose starvation 4h input replicate A
GSM1972529
HEPG2 mRNA Glucose starvation 4h IP replicate B
GSM1972530
HEPG2 mRNA Glucose starvation 4h input replicate B
GSM1972531
HEPG2 mRNA heat shock 4h IP
GSM1972532
HEPG2 mRNA heat shock 4h input
GSM1972533
HEPG2 total RNA Untreated IP replicate
GSM1972534
HEPG2 total RNA Untreated input replicate
GSM1972535
Saccharomyces_cerevisiae IP
GSM1972536
Saccharomyces_cerevisiae input
GSM1972537
WT SP1 vegetative IP
GSM1972538
WT SP1 vegetative Input
GSM1972539
WT SP1 EMM-N medium 4h IP
GSM1972540
WT SP1 EMM-N medium 4h input
GSM1973487
HEPG2 input 1
GSM1973488
HEPG2 input 2
GSM1973489
HEPG2 Sup 1
GSM1973490
HEPG2 Sup 2
This SuperSeries is composed of the following SubSeries:
GSE70485
m1A marks translation initiation sites in human and mouse messenger RNA [Sequencing]
GSE76057
m1A marks translation initiation sites in human and mouse messenger RNA [microarray]
Relations
BioProject
PRJNA306096
Download family
Format
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Supplementary file
Size
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File type/resource
GSE76058_RAW.tar
7.7 Mb
(http)
(custom)
TAR (of CEL)
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