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Series GSE83105 Query DataSets for GSE83105
Status Public on Jun 09, 2016
Title Expression data from Sertoli cells treated with 0.1μM NP, 0.1mM MBP, 0.1μM NP+0.1mM MBP and solvent control
Platform organisms Rattus norvegicus; synthetic construct
Sample organism Rattus norvegicus
Experiment type Expression profiling by array
Non-coding RNA profiling by array
Summary The combined effects of NP and MBP were much more toxic than NP or MBP exposed alone.
We used microarrays to detail the global programme of gene expression underlying cellularisation and identified distinct classes of up-regulated genes and miRNAs after treated with 0.1μM NP, 0.1mM MBP, 0.1μM NP+0.1mM MBP and solvent control.
 
Overall design Rat Sertoli cell were selected from rat testis for RNA extraction and hybridization on Affymetrix microarrays. We sought to obtain the differentially expressed genes and miRNAs in 0.1μM NP, 0.1mM MBP, 0.1μM NP+0.1mM MBP and solvent control treated Sertoli cells, respectively.
 
Contributor(s) Li D, Hu Y
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 08, 2016
Last update date Jul 27, 2018
Contact name Xiaoqin Yin
E-mail(s) [email protected]
Organization name School of medicine, Shanghai Jiao Tong University
Department Shanghai Children’s Hospital
Lab Department of endocrinology
Street address No. 355 Luding Road, Shanghai 200062, P.R.China.
City Shanghai
State/province Shanghai
ZIP/Postal code 200062
Country China
 
Platforms (2)
GPL6247 [RaGene-1_0-st] Affymetrix Rat Gene 1.0 ST Array [transcript (gene) version]
GPL16384 [miRNA-3] Affymetrix Multispecies miRNA-3 Array
Samples (8)
GSM2193090 Sertoli cells, control
GSM2193091 Sertoli cells, 0.1μM NP
GSM2193092 Sertoli cells, 0.1mM MBP
Relations
BioProject PRJNA324772

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE83105_OS130109002-Ragene1.0_Standard_Data.xlsx 12.4 Mb (ftp)(http) XLSX
GSE83105_OS130109002-miRNA3.0_Standard_Data.xlsx 197.5 Kb (ftp)(http) XLSX
GSE83105_RAW.tar 41.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
Processed data are available on Series record

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