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Series GSE85362 Query DataSets for GSE85362
Status Public on Nov 16, 2016
Title RNA-seq data of Paracoccus denitrificans grown under different N2O levels
Organism Paracoccus denitrificans
Experiment type Expression profiling by high throughput sequencing
Summary We report here the RNA seq results of sRNA enriched Paracoccus denitrificans grown under three different N2O levels (high N2O reffered to as CuL/ low N2O reffered to as CuH/ Low N2O aerobic reffered to as CuH O2)
 
Overall design Three different copper regimes for 16 hours. Total RNA was isolated and processed by vertis Biotechnologie AG to isolate the sRNA fraction. This was then converted to cDNA and sequenced.
 
Contributor(s) Gaimster H
Citation(s) 27895629
Submission date Aug 09, 2016
Last update date May 15, 2019
Contact name Hannah Gaimster
E-mail(s) [email protected]
Organization name UEA
Street address Norwich Research Park
City Norwich
ZIP/Postal code NR4 7TJ
Country United Kingdom
 
Platforms (1)
GPL22301 Illumina NextSeq 500 (Paracoccus denitrificans)
Samples (3)
GSM2265841 CuH-O2-sRNA
GSM2265842 CuH-sRNA
GSM2265843 CuL-sRNA
Relations
BioProject PRJNA338275
SRA SRP081143

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE85362_RAW.tar 6.4 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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