NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE87387 Query DataSets for GSE87387
Status Public on Sep 26, 2017
Title RNA-seq of primary murine lung adenocarcinoma cells from KP and JKP mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The AP-1 transcription factor c-Jun is required for Ras-driven tumorigenesis in many tissues. Surprisingly, we found that inactivation of c-Jun increased tumor burden in a model of K-RasG12D-induced lung adenocarcinoma.
 
Overall design mRNA-seq of KP vs. JKP isolated adenocarcinoma cell lines, in triplicate
 
Contributor(s) Diefenbacher M, Riising E, Behrens A
Citation(s) 34236045
Submission date Sep 27, 2016
Last update date Sep 14, 2021
Contact name Gavin Kelly
Organization name Francis Crick institute
Lab Bioinformatics
Street address 1 Midland Road
City London
State/province London
ZIP/Postal code NW1 1AT
Country United Kingdom
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (6)
GSM2330062 JKP rep1
GSM2330063 JKP rep2
GSM2330064 JKP rep3
Relations
BioProject PRJNA344655
SRA SRP090510

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE87387_deseq2.normcounts.txt.gz 678.8 Kb (ftp)(http) TXT
GSE87387_deseq2.rawcounts.txt.gz 244.7 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap