|
| Status |
Public on Sep 08, 2017 |
| Title |
small RNAs produced in the mutant Dicer-2 transgenic flies |
| Organisms |
Drosophila melanogaster; synthetic construct |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
Examine the abundance and length of siRNAs produced by mutant Dicer-2 in vivo and in vitro in order to understand the mechanism by which Dicer-2 produces highly precise 21 nt siRNAs.
|
| |
|
| Overall design |
Examine the abundance and length of siRNAs produced by mutant Dicer-2 in vivo and in vitro
|
| |
|
| Citation(s) |
28416567 |
| |
| Submission date |
Feb 12, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Ryuya Fukunaga |
| E-mail(s) |
[email protected]
|
| Phone |
4109553790
|
| Organization name |
Johns Hopkins University School of Medicine
|
| Department |
Department of Biological Chemistry
|
| Street address |
725 N. Wolfe St. 521A Physiology Bldg
|
| City |
BALTIMORE |
| State/province |
MD |
| ZIP/Postal code |
21205 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL21306 |
Illumina HiSeq 4000 (Drosophila melanogaster) |
| GPL21616 |
Illumina HiSeq 4000 (synthetic construct) |
|
| Samples (4)
|
| GSM2310235 |
small RNAs in the dicer-2[null] rescued by the transgenic Dicer-2 [DHelicase] |
| GSM2310236 |
small RNAs in the dicer-2[null] rescued by the transgenic Dicer-2 [DCdsRBD] |
| GSM2310237 |
small RNAs produced by Dicer-2 [DHelicase] in vitro |
| GSM2310238 |
small RNAs produced by Dicer-2 [DCdsRBD] in vitro |
|
| Relations |
| BioProject |
PRJNA374414 |
| SRA |
SRP100946 |
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