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Series GSE98304 Query DataSets for GSE98304
Status Public on Mar 06, 2019
Title Transfer RNA Genes Affect Chromosome Architecture and Function
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary In this study we investigated the role of tDNAs in genomic organization and nuclear function by editing a chromosome so that it lacks any tDNAs.
 
Overall design Mnase-seq of wildtype and tRNA-deleted S. cerevisiae strains.
 
Contributor(s) Ocampo J, Clark DJ
Citation(s) 30718362
Submission date Apr 27, 2017
Last update date Jul 25, 2021
Contact name Josefina Ocampo
E-mail(s) [email protected]
Phone 3014511339
Organization name NIH
Department NICHD
Lab David J Clark lab
Street address 6 Center Drive
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (4)
GSM2590669 558J_1_200U
GSM2590670 558J_2_200U
GSM2590671 559J_1_200U
Relations
BioProject PRJNA384632
SRA SRP105361

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98304_RAW.tar 111.3 Mb (http)(custom) TAR (of BIGWIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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