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Series GSE98881 Query DataSets for GSE98881
Status Public on Mar 07, 2018
Title Epitope mapping of 11 monoclonal antibodies directed against Neisserial adesin A by peptide microarray
Platform organism Neisseria meningitidis serogroup B
Sample organism Homo sapiens
Experiment type Protein profiling by protein array
Summary The aim of the study was to determine the epitope targeted by four different HumAbs and the cross-reactivity to linear peptide epitopes of 5 different Neisserial adesin A (NadA) variants. the HumAbs were diluted at 1:200 and incubated on a custom PepStar Peptide Microarray platform printed with 348 different peptides.
 
Overall design A panel of 348 peptides (15-mer overlapping peptides with an offset of 4 amino acids) covering the entire sequence of five different NadA variants (var1, var2, var3, var4 and var5) were printed in triplicate on a custom PepStar Peptide Microarray. Process-control peptide (GGSGGGSDYKDDDDK) and human IgG were distributed in each array copy as controls. the HumAbs were profiled for anti-human IgG specific analysis of reactivity to the peptide epitopes
 
Contributor(s) Bartolini E, Bruttini M
Citation(s) 29487324, 31442074
Submission date May 12, 2017
Last update date Jul 25, 2021
Contact name Erika Bartolini
Organization name GSK Vaccines
Department AIMB
Lab Molecular Biology
Street address Via Fiorentina 1
City Siena
State/province Italy
ZIP/Postal code 53100
Country Italy
 
Platforms (1)
GPL23476 JPT PepStarâ„¢ Peptide Microarrays [NadA]
Samples (11)
GSM2617181 HumAb 10D12
GSM2617182 HumAb 11F7
GSM2617183 HumAb 12H11
This SubSeries is part of SuperSeries:
GSE98883 Epitope mapping of human antibodies directed against 4CmenB protein components
Relations
BioProject PRJNA386497

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98881_RAW.tar 1.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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